RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA436017", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA436017 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5534313 5534313 PRJNA436017_P_NODE_10945_length_259_cov_2.049550_g10647_i0 PRJNA436017 10945 259 2.04955 5.3083345 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 144 2.7e-42   NR UCK81569.1 6344 g10647 i0 82.4 99.0579150579151 85 15 98.5 0 257 3 13 97 UCK81569.1 histone H2A [Arenicola marina] diamond 25656 144 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Arenicolidae Arenicola Arenicola marina
27345332 27345332 PRJNA436017_P_NODE_15263_length_212_cov_1.777143_g14965_i0 PRJNA436017 15263 212 1.777143 3.76754316 Opisthokonta 33154 Annelida Annelida 92 5.96e-21   NR KAK2165843.1 53620 g14965 i0 57.1 10.0047169811321 70 30 99.1 0 3 212 144 213 KAK2165843.1 hypothetical protein LSH36_45g16082 [Paralvinella palmiformis] diamond 2121 92 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
31624410 31624410 PRJNA436017_P_NODE_5656_length_379_cov_2.154971_g5360_i0 PRJNA436017 5656 379 2.154971 8.16734009 Helobdella robusta 6412 Annelida Annelida 92.4 1.7e-20   NR XP_009022231.1 6412 g5360 i0 41.7 0.910290237467018 115 67 91 0 363 19 78 192 XP_009022231.1 hypothetical protein HELRODRAFT_184769, partial [Helobdella robusta] diamond 345 92.4 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;