RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA436017", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA436017 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2981428 2981428 PRJNA436017_P_NODE_19463_length_185_cov_1.844595_g19165_i0 PRJNA436017 19463 185 1.844595 3.41250075 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 217 5.29e-52   NTclustered gi|2522768008|gb|OR162445.1| 646526 g19165 i0 89.474 0.924324324324324 171 18 92 0 15 185 2841 3011 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 171 217 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
2981636 2981636 PRJNA436017_P_NODE_4323_length_444_cov_6.710074_g4031_i0 PRJNA436017 4323 444 6.710074 29.79272856 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 429 1.7e-115   NTclustered gi|2522768008|gb|OR162445.1| 646526 g4031 i0 84.222 7.24099099099099 450 61 100 10 1 444 1754 2199 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3215 429 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
4257711 4257711 PRJNA436017_P_NODE_18484_length_190_cov_3.836601_g18186_i0 PRJNA436017 18484 190 3.836601 7.2895419 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 161 2.6e-35   NTclustered gi|2522768008|gb|OR162445.1| 646526 g18186 i0 82.383 1.01578947368421 193 27 100 7 1 190 2759 2571 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 193 161 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
21490820 21490820 PRJNA436017_P_NODE_15697_length_209_cov_1.075581_g15399_i0 PRJNA436017 15697 209 1.075581 2.24796429 Ecytonucleospora 3078583 Fungi Fungi 250 6.05e-62   NTclustered gi|1023344233|gb|KU198278.1| 546761 g15399 i0 88.517 94.6172248803828 209 21 100 3 1 209 333 128 Uncultured Enterocytozoonidae isolate EHPAAHL01 small subunit ribosomal RNA gene, partial sequence blastn 19775 250 1 Eukaryota Opisthokonta Fungi Microsporidia         uncultured Enterocytozoonidae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;