RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA436017", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA436017 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27755919 27755919 PRJNA436017_P_NODE_28524_length_153_cov_1.008621_g28226_i0 PRJNA436017 28524 153 1.008621 1.54319013 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.0012   NR KAF4657565.1 32597 g28226 i0 37.3 6 51 32 100 0 1 153 44 94 KAF4657565.1 60S ribosomal protein L12, partial [Perkinsus olseni] diamond 918 45.8 0.991266375545852 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
29570388 29570388 PRJNA436017_P_NODE_20830_length_179_cov_1.633803_g20532_i0 PRJNA436017 20830 179 1.633803 2.92450737 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 95.5 8.039999999999999e-23   NR XP_002778466.1 423536 g20532 i0 74.6 1.94413407821229 59 15 98.9 0 3 179 36 94 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 348 95.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;