RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where bioproject = "PRJNA436017", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 21 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 21 ✖

bioproject 1

  • PRJNA436017 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
430644 430644 PRJNA436017_P_NODE_13701_length_226_cov_1.365079_g13403_i0 PRJNA436017 13701 226 1.365079 3.08507854 Mucor mucedo 29922 Fungi Fungi 119 1.96e-22   NTclustered gi|2324050181|ref|XM_051601360.1| 29922 g13403 i0 80.247 24.5265486725664 162 28 71 4 65 224 211 52 Mucor mucedo histone-fold-containing protein (EV154DRAFT_507085), mRNA blastn 5543 119 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
4257908 4257908 PRJNA436017_P_NODE_28204_length_154_cov_0.982906_g27906_i0 PRJNA436017 28204 154 0.982906 1.51367524 Lichtheimia ornata 688661 Fungi Fungi 89.8 9.63e-14   NTclustered gi|2553578231|ref|XM_058486242.1| 688661 g27906 i0 83.871 3.40909090909091 93 15 60 0 22 114 354 262 Lichtheimia ornata uncharacterized protein (O0I10_006211), partial mRNA blastn 525 89.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
5534349 5534349 PRJNA436017_P_NODE_1325_length_819_cov_3.661125_g1132_i0 PRJNA436017 1325 819 3.661125 29.98461375 Fungi 4751 Fungi Fungi 284 1.4399999999999997e-92   NR CEI87358.1 58291 g1132 i0 65.9 17.6996336996337 208 71 76.2 0 27 650 44 251 CEI87358.1 Putative 60S ribosomal protein L10-A [Rhizopus microsporus] diamond 14496 286 0.993006993006993 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
5534423 5534423 PRJNA436017_P_NODE_17145_length_198_cov_2.776398_g16847_i0 PRJNA436017 17145 198 2.776398 5.49726804 Cokeromyces recurvatus 90255 Fungi Fungi 67.6 6.13e-7   NTclustered gi|2324069678|ref|XM_051523051.1| 90255 g16847 i0 91.667 0.792929292929293 48 4 24 0 151 198 369 322 Cokeromyces recurvatus putative ribosomal protein S15 (BX663DRAFT_434146), partial mRNA blastn 157 67.6 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus
11909431 11909431 PRJNA436017_P_NODE_14190_length_221_cov_2.282609_g13892_i0 PRJNA436017 14190 221 2.282609 5.04456589 Cokeromyces recurvatus 90255 Fungi Fungi 156 1.45e-33   NTclustered gi|2324061888|ref|XM_051531209.1| 90255 g13892 i0 83.735 73.7285067873303 166 25 75 2 1 165 496 660 Cokeromyces recurvatus 60S ribosomal protein L2 (BX663DRAFT_550341), partial mRNA blastn 16294 156 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus
15733239 15733239 PRJNA436017_P_NODE_12773_length_235_cov_3.106061_g12475_i0 PRJNA436017 12773 235 3.106061 7.29924335 Opisthokonta 33154 Fungi Fungi 105 5.34e-27   NR XP_069237652.1 4840 g12475 i0 75 71.3106382978723 68 17 86.8 0 228 25 41 108 XP_069237652.1 uncharacterized protein VTP01DRAFT_2149 [Rhizomucor pusillus] diamond 16758 106 0.990566037735849 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
18940471 18940471 PRJNA436017_P_NODE_13095_length_232_cov_1.502564_g12797_i0 PRJNA436017 13095 232 1.502564 3.48594848 Fungi 4751 Fungi Fungi 385 1.7999999999999996e-102   NTclustered gi|1402384622|gb|MH483598.1| 64518 g12797 i0 97.357 96.2198275862069 227 4 97 2 7 232 230 455 Mortierella alpina isolate CK595 large subunit ribosomal RNA gene, partial sequence blastn 22323 385 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Mortierella Mortierella alpina
22107172 22107172 PRJNA436017_P_NODE_11218_length_255_cov_2.192661_g10920_i0 PRJNA436017 11218 255 2.192661 5.59128555 uncultured Glomeromycotina 241622 Fungi Fungi 198 2.81e-46   NTclustered gi|219959662|gb|FJ567202.1| 241622 g10920 i0 81.961 100 255 26 100 11 1 255 635 401 Uncultured glomeromycete clone A2YM02RM1 large subunit ribosomal RNA gene, partial sequence blastn 25500 198 1 Eukaryota Opisthokonta Fungi Mucoromycota         uncultured Glomeromycotina
23382780 23382780 PRJNA436017_P_NODE_1079_length_902_cov_2.937572_g913_i0 PRJNA436017 1079 902 2.937572 26.49689944 Calcarisporiella thermophila 911321 Fungi Fungi 356 1.03e-120   NR XP_069256216.1 911321 g913 i0 66 11.5044345898004 253 86 84.1 0 901 143 4 256 XP_069256216.1 60S ribosomal protein uL2 [Calcarisporiella thermophila] diamond 10377 356 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
23383214 23383214 PRJNA436017_P_NODE_6919_length_339_cov_1.824503_g6622_i0 PRJNA436017 6919 339 1.824503 6.18506517 Rhizophagus intraradices 4876 Fungi Fungi 200 1.08e-46   NTclustered gi|240147765|gb|FJ235566.1| 4876 g6622 i0 78.551 48.4896755162242 345 45 99 19 1 338 1708 2030 Glomus intraradices clone rLU_21 25S large subunit ribosomal RNA, partial sequence blastn 16438 200 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus intraradices
24040901 24040901 PRJNA436017_P_NODE_7579_length_322_cov_2.161404_g7282_i0 PRJNA436017 7579 322 2.161404 6.95972088 Mucoromycota 1913637 Fungi Fungi 171 8e-38   NTclustered gi|2724945977|ref|XM_064823284.1| 708070 g7282 i0 87.333 60.6832298136646 150 17 46 2 174 322 456 308 Mucor velutinosus uncharacterized protein (ATC70_003929), partial mRNA blastn 19540 171 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
24656952 24656952 PRJNA436017_P_NODE_13580_length_227_cov_1.863158_g13282_i0 PRJNA436017 13580 227 1.863158 4.22936866 root 1 Root_unresolved Root_unresolved 114 2.11e-28   NR CEG63882.1 58291 g13282 i0 75.3 15.3832599118943 73 18 96.5 0 219 1 219 291 CEG63882.1 Putative Genomic scaffold, msy_sf_12 [Rhizopus microsporus] diamond 3492 114 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
27028994 27028994 PRJNA436017_P_NODE_3462_length_503_cov_1.137339_g3181_i0 PRJNA436017 3462 503 1.137339 5.72081517 Eukaryota 2759 Fungi Fungi 96.7 2.48e-22   NR ORZ02875.1 13706 g3181 i0 52 9.43538767395626 123 58 72.8 1 24 389 1 123 ORZ02875.1 ribosomal L29 protein-domain-containing protein [Syncephalastrum racemosum] diamond 4746 97.4 0.992813141683778 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Syncephalastraceae Syncephalastrum Syncephalastrum racemosum
27755915 27755915 PRJNA436017_P_NODE_15584_length_209_cov_4.151163_g15286_i0 PRJNA436017 15584 209 4.151163 8.67593067 Fungi 4751 Fungi Fungi 77 6.15e-15   NR XP_051419883.1 64574 g15286 i0 67.2 10.8947368421053 64 21 91.9 0 192 1 114 177 XP_051419883.1 50S ribosomal protein L30e-like protein [Radiomyces spectabilis] diamond 2277 77 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
28513434 28513434 PRJNA436017_P_NODE_22707_length_171_cov_1.746269_g22409_i0 PRJNA436017 22707 171 1.746269 2.98611999 Eukaryota 2759 Fungi Fungi 86.7 6.73e-19   NR KAF7723836.1 679940 g22409 i0 70.9 5.80701754385965 55 16 96.5 0 3 167 164 218 KAF7723836.1 40S ribosomal protein [Apophysomyces ossiformis] diamond 993 86.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Apophysomyces Apophysomyces ossiformis
29208236 29208236 PRJNA436017_P_NODE_23649_length_168_cov_1.152672_g23351_i0 PRJNA436017 23649 168 1.152672 1.93648896 root 1 Root_unresolved Root_unresolved 73.9 6.29e-14   NR CAG8784121.1 160502 g23351 i0 64.3 9.89285714285714 56 19 98.2 1 167 3 127 182 CAG8784121.1 1249_t:CDS:2, partial [Racocetra persica] diamond 1662 73.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Racocetra Racocetra persica
30107333 30107333 PRJNA436017_P_NODE_8012_length_312_cov_3.370909_g7715_i0 PRJNA436017 8012 312 3.370909 10.51723608 Geosiphon pyriformis 50956 Fungi Fungi 63.5 2.93e-10   NR KAG9295949.1 50956 g7715 i0 38.7 1.96153846153846 106 44 99 4 309 1 10 97 KAG9295949.1 hypothetical protein G9A89_011801 [Geosiphon pyriformis] diamond 612 63.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Archaeosporales Geosiphonaceae Geosiphon Geosiphon pyriformis
30802524 30802524 PRJNA436017_P_NODE_5374_length_391_cov_1.742938_g5078_i0 PRJNA436017 5374 391 1.742938 6.81488758 Cetraspora pellucida 1433469 Fungi Fungi 66.2 9.44e-10   NR CAG8691181.1 1433469 g5078 i0 32.3 0.974424552429668 127 77 97.4 3 383 3 164 281 CAG8691181.1 21633_t:CDS:2, partial [Cetraspora pellucida] diamond 381 66.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Cetraspora Cetraspora pellucida
31339735 31339735 PRJNA436017_P_NODE_7996_length_312_cov_40.669091_g7699_i0 PRJNA436017 7996 312 40.669091 126.88756392 Calcarisporiella thermophila 911321 Fungi Fungi 53.9 8.42e-7   NR KAL1914197.1 911321 g7699 i0 49.4 0.759615384615385 79 30 71.2 4 6 227 11 84 KAL1914197.1 hypothetical protein VTP21DRAFT_9681 [Calcarisporiella thermophila] diamond 237 53.9 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
31655890 31655890 PRJNA436017_P_NODE_14437_length_219_cov_1.714286_g14139_i0 PRJNA436017 14437 219 1.714286 3.75428634 Mucor ambiguus 91626 Fungi Fungi 48.9 8.33e-5   NR GAN02220.1 91626 g14139 i0 42.6 3.76712328767123 68 37 91.8 2 217 17 100 166 GAN02220.1 40S ribosomal protein S25 [Mucor ambiguus] diamond 825 48.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor ambiguus
32762449 32762449 PRJNA436017_P_NODE_10880_length_260_cov_1.748879_g10582_i0 PRJNA436017 10880 260 1.748879 4.5470854 Rhizomucor pusillus 4840 Fungi Fungi 70.9 1.02e-12   NR XP_069239425.1 4840 g10582 i0 51.4 2.61923076923077 74 36 85.4 0 248 27 130 203 XP_069239425.1 60S ribosomal protein uL13 [Rhizomucor pusillus] diamond 681 70.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;