RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA436017", tax_clade = "Luna-1 subcluster" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Luna-1 subcluster · 2 ✖

bioproject 1

  • PRJNA436017 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11292161 11292161 PRJNA436017_P_NODE_12449_length_239_cov_2.490099_g12151_i0 PRJNA436017 12449 239 2.490099 5.95133661 Rhodoluna 529883 Bacteria Bacteria 374 4.039999999999998e-99   NTclustered gi|1666461687|gb|CP040509.1| 232537 g12151 i0 96.104 141.782426778243 231 5 96 3 1 229 478090 478318 Rhodoluna limnophila strain 27D-LEPI chromosome, complete genome blastn 33886 374 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna limnophila
21490871 21490871 PRJNA436017_P_NODE_26837_length_157_cov_2.700000_g26539_i0 PRJNA436017 26837 157 2.7 4.239 Rhodoluna 529883 Bacteria Bacteria 279 5.46e-71   NTclustered gi|1666461687|gb|CP040509.1| 232537 g26539 i0 98.726 155.700636942675 157 2 100 0 1 157 477951 477795 Rhodoluna limnophila strain 27D-LEPI chromosome, complete genome blastn 24445 279 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna limnophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;