RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA436017", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 3 ✖

bioproject 1

  • PRJNA436017 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19556665 19556665 PRJNA436017_P_NODE_21856_length_175_cov_1.123188_g21558_i0 PRJNA436017 21856 175 1.123188 1.965579 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 107 1.86e-25   NR KAL1520593.1 97485 g21558 i0 82.8 1.98857142857143 58 10 99.4 0 174 1 567 624 KAL1520593.1 hypothetical protein AB1Y20_022169 [Prymnesium parvum] diamond 348 108 0.990740740740741 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
26822823 26822823 PRJNA436017_P_NODE_18361_length_191_cov_1.733766_g18063_i0 PRJNA436017 18361 191 1.733766 3.31149306 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 63.9 5.42e-11   NR KAG8467390.1 2081491 g18063 i0 61.2 0.769633507853403 49 19 77 0 148 2 8 56 KAG8467390.1 hypothetical protein KFE25_000706 [Diacronema lutheri] diamond 147 63.9 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri
31593035 31593035 PRJNA436017_P_NODE_24256_length_166_cov_0.906977_g23958_i0 PRJNA436017 24256 166 0.906977 1.50558182 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 95.1 4.71e-21   NR KAG8468248.1 2081491 g23958 i0 84.9 0.957831325301205 53 8 95.8 0 8 166 448 500 KAG8468248.1 hypothetical protein KFE25_013331 [Diacronema lutheri] diamond 159 95.1 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;