contig_metadata
4 rows where bioproject = "PRJNA436017", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5534672 | 5534672 | PRJNA436017_P_NODE_3765_length_480_cov_1.860045_g3480_i0 | PRJNA436017 | 3765 | 480 | 1.860045 | 8.928216 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 497 | 4.999999999999999e-136 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g3480 | i0 | 85.569 | 76.5729166666667 | 492 | 51 | 100 | 19 | 1 | 480 | 422668 | 422185 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 36755 | 497 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 7467055 | 7467055 | PRJNA436017_P_NODE_11266_length_254_cov_4.023041_g10968_i0 | PRJNA436017 | 11266 | 254 | 4.023041 | 10.21852414 | Gemmatimonas | 173479 | Bacteria | Bacteria | 99 | 2.92e-16 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g10968 | i0 | 86.667 | 17.2165354330709 | 90 | 10 | 35 | 1 | 31 | 120 | 173 | 260 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 4373 | 99 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 24656909 | 24656909 | PRJNA436017_P_NODE_11420_length_252_cov_3.632558_g11122_i0 | PRJNA436017 | 11420 | 252 | 3.632558 | 9.15404616 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 438 | 1.5e-118 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g11122 | i0 | 98.016 | 149.055555555556 | 252 | 5 | 100 | 0 | 1 | 252 | 421979 | 421728 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 37562 | 438 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 31244853 | 31244853 | PRJNA436017_P_NODE_29695_length_150_cov_1.035398_g29397_i0 | PRJNA436017 | 29695 | 150 | 1.035398 | 1.553097 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 62.8 | 8.67e-10 | NR | HEX6816644.1 | 2026741 | g29397 | i0 | 67.3 | 3.92 | 49 | 16 | 98 | 0 | 3 | 149 | 294 | 342 | HEX6816644.1 magnesium-translocating P-type ATPase [Gemmatimonadaceae bacterium] | diamond | 588 | 62.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;