RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA436017", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 1 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 1 ✖

bioproject 1

  • PRJNA436017 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30945476 30945476 PRJNA436017_P_NODE_18354_length_191_cov_1.831169_g18056_i0 PRJNA436017 18354 191 1.831169 3.49753279 Pseudomonadati 3379134 Bacteria Bacteria 100 5.88e-23   NR MCF7793220.1 2030808 g18056 i0 68.3 8.89005235602094 63 20 99 0 3 191 27 89 MCF7793220.1 aminopeptidase P family protein [Candidatus Cloacimonadota bacterium] diamond 1698 101 0.99009900990099 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;