RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA436017", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA436017 · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8083903 8083903 PRJNA436017_P_NODE_13327_length_230_cov_1.212435_g13029_i0 PRJNA436017 13327 230 1.212435 2.7886005 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 107 1.37e-25   NR XP_013758005.1 461836 g13029 i0 70.3 2.92173913043478 74 22 96.5 0 9 230 264 337 XP_013758005.1 uncharacterized protein AMSG_05289 [Thecamonas trahens ATCC 50062] diamond 672 107 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
14459475 14459475 PRJNA436017_P_NODE_14972_length_215_cov_1.269663_g14674_i0 PRJNA436017 14972 215 1.269663 2.72977545 Thecamonas trahens 529818 Root_unresolved Root_unresolved 204 4.949999999999999e-48   NTclustered gi|761380055|ref|NC_026452.1| 529818 g14674 i0 94.03 64.0372093023256 134 8 62 0 1 134 1829 1962 Thecamonas trahens strain ATCC 50062 mitochondrion, complete genome blastn 13768 204 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27138673 27138673 PRJNA436017_P_NODE_4522_length_433_cov_3.330808_g4227_i0 PRJNA436017 4522 433 3.330808 14.42239864 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 93.2 5.22e-21   NR XP_013758370.1 461836 g4227 i0 36.8 0.921478060046189 133 79 92.1 1 429 31 14 141 XP_013758370.1 uncharacterized protein AMSG_04698 [Thecamonas trahens ATCC 50062] diamond 399 93.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27739567 27739567 PRJNA436017_P_NODE_13964_length_223_cov_2.080645_g13666_i0 PRJNA436017 13964 223 2.080645 4.63983835 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 49.3 1.33e-4   NR XP_013755835.1 461836 g13666 i0 42.7 1.77578475336323 75 37 92.8 2 3 209 74 148 XP_013755835.1 uncharacterized protein AMSG_07772 [Thecamonas trahens ATCC 50062] diamond 396 49.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;