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contig_metadata

16 rows where bioproject = "PRJNA436017", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 16 ✖

tax_clade 1

  • Amoebozoa · 16 ✖

bioproject 1

  • PRJNA436017 · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1705736 1705736 PRJNA436017_P_NODE_27422_length_156_cov_1.277311_g27124_i0 PRJNA436017 27422 156 1.277311 1.99260516 Paravannella minima 1443144 Discosea other_Eukaryota 115 1.62e-21   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g27124 i0 88.421 16.2051282051282 95 11 61 0 62 156 2845 2751 Paravannella minima mitochondrion, complete genome blastn 2528 115 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
4257963 4257963 PRJNA436017_P_NODE_4164_length_453_cov_4.016827_g3873_i0 PRJNA436017 4164 453 4.016827 18.19622631 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 634 3.429999999999999e-177   NTclustered gi|659103923|gb|KJ569725.1| 1512276 g3873 i0 91.957 60.2185430463576 460 26 99 9 1 452 666 1122 Cochliopodium kieliense clone 9601 18S ribosomal RNA gene, partial sequence blastn 27279 634 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
5534693 5534693 PRJNA436017_P_NODE_5065_length_405_cov_2.203804_g4769_i0 PRJNA436017 5065 405 2.203804 8.9254062 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 713 0   NTclustered gi|354720325|gb|HQ687484.1| 1105345 g4769 i0 99.491 50.0666666666667 393 1 97 1 1 392 842 1234 Vexillifera bacillipedes strain TIL2 small subunit ribosomal RNA gene, partial sequence blastn 20277 713 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
6192167 6192167 PRJNA436017_P_NODE_6585_length_348_cov_62.331190_g6288_i0 PRJNA436017 6585 348 62.33119 216.9125412 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 89.8 2.51e-13   NTclustered gi|300078498|gb|GU001160.1| 5755 g6288 i0 87.342 1.83045977011494 79 9 22 1 271 348 5239 5161 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 637 89.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7467079 7467079 PRJNA436017_P_NODE_14466_length_219_cov_1.461538_g14168_i0 PRJNA436017 14466 219 1.461538 3.20076822 Planopodium 2823620 Discosea other_Eukaryota 405 1.29e-108   NTclustered gi|330902850|gb|JF298244.1| 2773111 g14168 i0 100 58.6164383561644 219 0 100 0 1 219 790 1008 Ovalopodium desertum clone 3702 18S ribosomal RNA gene, partial sequence blastn 12837 405 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Planopodium Planopodium desertum
8083866 8083866 PRJNA436017_P_NODE_11227_length_255_cov_1.894495_g10929_i0 PRJNA436017 11227 255 1.894495 4.83096225 Vannella septentrionalis 197531 Discosea other_Eukaryota 472 1.5e-128   NTclustered gi|300078499|gb|GU001161.1| 197531 g10929 i0 100 75.0039215686274 255 0 100 0 1 255 2716 2970 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 19126 472 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
9359027 9359027 PRJNA436017_P_NODE_3308_length_514_cov_14.930818_g3030_i0 PRJNA436017 3308 514 14.930818 76.74440452 Paramoeba perurans 437603 Discosea other_Eukaryota 313 2.09e-80   NTclustered gi|145386784|gb|EF216909.1| 437603 g3030 i0 81.606 38.3657587548638 386 63 74 8 1 382 38 419 Neoparamoeba perurans strain GD-HAC/1 28S large subunit ribosomal RNA gene, partial sequence blastn 19720 313 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
10634687 10634687 PRJNA436017_P_NODE_23029_length_170_cov_1.428571_g22731_i0 PRJNA436017 23029 170 1.428571 2.4285707 Ripella sp. 805 1217113 Discosea other_Eukaryota 259 7.8e-65   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g22731 i0 98.639 72.5470588235294 147 1 86 1 1 147 60 205 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 12333 259 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
13184273 13184273 PRJNA436017_P_NODE_11971_length_245_cov_6.072115_g11673_i0 PRJNA436017 11971 245 6.072115 14.87668175 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 348 2.5200000000000005e-91   NTclustered gi|659103927|gb|KJ569727.1| 1512276 g11673 i0 95.089 28.334693877551 224 5 89 6 27 245 4 226 Cochliopodium kieliense clone 9611 18S ribosomal RNA gene, partial sequence blastn 6942 348 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
17008188 17008188 PRJNA436017_P_NODE_29814_length_150_cov_0.973451_g29516_i0 PRJNA436017 29814 150 0.973451 1.4601765 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 250 4.04e-62   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g29516 i0 96.689 105.7 151 4 100 1 1 150 34047 34197 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 15855 250 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
17008250 17008250 PRJNA436017_P_NODE_594_length_1142_cov_45.026244_g488_i0 PRJNA436017 594 1142 45.026244 514.19970648 Acanthamoeba comandoni 65659 Discosea other_Eukaryota 150 4.01e-31   NTclustered gi|28194600|gb|AF479544.1| 65659 g488 i0 78.333 10.4474605954466 240 47 21 4 197 434 927 691 Acanthamoeba comandoni strain ATCC 30135 16S small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product blastn 11931 150 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba comandoni
20215220 20215220 PRJNA436017_P_NODE_15496_length_210_cov_2.184971_g15198_i0 PRJNA436017 15496 210 2.184971 4.5884391 Vannella 95228 Discosea other_Eukaryota 359 9.7e-95   NTclustered gi|270381377|emb|FN598227.1| 544561 g15198 i0 98.522 92.3047619047619 203 3 97 0 8 210 1045 843 Uncultured Vannellidae partial 18S rRNA gene, clone BIO1_A11 blastn 19384 359 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae   uncultured Vannellidae
23382939 23382939 PRJNA436017_P_NODE_1899_length_686_cov_10.326656_g1668_i0 PRJNA436017 1899 686 10.326656 70.84086016 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 1214 0   NTclustered gi|354720325|gb|HQ687484.1| 1105345 g1668 i0 98.688 50.902332361516 686 5 100 2 1 686 692 11 Vexillifera bacillipedes strain TIL2 small subunit ribosomal RNA gene, partial sequence blastn 34919 1214 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
28149794 28149794 PRJNA436017_P_NODE_17325_length_197_cov_1.918750_g17027_i0 PRJNA436017 17325 197 1.91875 3.7799375 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 80.9 1.88e-16   NR XP_004333661.1 1257118 g17027 i0 69.2 0.989847715736041 65 20 99 0 195 1 171 235 XP_004333661.1 actin bundling protein [Acanthamoeba castellanii str. Neff] diamond 195 80.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29886451 29886451 PRJNA436017_P_NODE_21171_length_178_cov_1.078014_g20873_i0 PRJNA436017 21171 178 1.078014 1.91886492 Paravannella minima 1443144 Discosea other_Eukaryota 99 2.35e-22   NR YP_009557774.1 1443144 g20873 i0 74.6 1.98876404494382 59 15 99.4 0 1 177 390 448 YP_009557774.1 NADH dehydrogenase subunit 4 [Paravannella minima] diamond 354 99 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
30107329 30107329 PRJNA436017_P_NODE_29172_length_151_cov_1.368421_g28874_i0 PRJNA436017 29172 151 1.368421 2.06631571 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 57 3.6e-8   NR XP_004333244.1 1257118 g28874 i0 66.7 1.62913907284768 36 12 71.5 0 113 6 70 105 XP_004333244.1 MAPEG family protein [Acanthamoeba castellanii str. Neff] diamond 246 57 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;