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contig_metadata

32 rows where bioproject = "PRJNA432257" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 32 ✖

tax_clade 1

bioproject 1

  • PRJNA432257 · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1088594 1088594 PRJNA432257_S_NODE_121541_length_155_cov_3.042373_g121160_i0 PRJNA432257 121541 155 3.042373 4.71567815 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 270 3.23e-68   NTclustered gi|1837628855|gb|MN158348.1| 5909 g121160 i0 98.065 90.0322580645161 155 3 100 0 1 155 2903 2749 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 13955 270 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
4256929 4256929 PRJNA432257_S_NODE_63464_length_211_cov_22.988506_g63083_i0 PRJNA432257 63464 211 22.988506 48.50574766 Philasterides dicentrarchi 282688 SAR_Eukaryotes SAR_Eukaryotes 235 1.71e-57   NTclustered gi|49616744|gb|AY643504.1| 282688 g63083 i0 90.857 83.1279620853081 175 16 83 0 37 211 127 301 Philasterides dicentrarchi 26S ribosomal RNA gene, partial sequence blastn 17540 235 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Philasteridae Philasterides Philasterides dicentrarchi
5533442 5533442 PRJNA432257_S_NODE_47485_length_235_cov_45.742424_g47104_i0 PRJNA432257 47485 235 45.742424 107.4946964 Oxytricha trifallax 1172189 SAR_Eukaryotes SAR_Eukaryotes 126 1.22e-24   NTclustered gi|6851292|gb|AF192970.1| 1172189 g47104 i0 89.796 1.71489361702128 98 10 42 0 97 194 1456 1359 Oxytricha trifallax histone H4 gene, complete cds blastn 403 126 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Oxytricha Oxytricha trifallax
13842180 13842180 PRJNA432257_S_NODE_29971_length_279_cov_19.119835_g29590_i0 PRJNA432257 29971 279 19.119835 53.34433965 root 1 Root_unresolved Root_unresolved 438 1.6899999999999996e-118   NTclustered gi|10782|emb|X54004.1| 5908 g29590 i0 98.785 81.1362007168459 247 1 88 2 35 279 2538 2784 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 22637 438 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
15732924 15732924 PRJNA432257_S_NODE_91373_length_183_cov_2.102740_g90992_i0 PRJNA432257 91373 183 2.10274 3.8480142 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 291 3.03e-74   NTclustered gi|2651357791|gb|PP174306.1| 41631 g90992 i0 95.161 23.9344262295082 186 6 100 1 1 183 3861 3676 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 4380 291 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
17666440 17666440 PRJNA432257_S_NODE_72694_length_200_cov_35.558282_g72313_i0 PRJNA432257 72694 200 35.558282 71.116564 root 1 Root_unresolved Root_unresolved 370 4.22e-98   NTclustered gi|10832|emb|X54512.1| 5911 g72313 i0 100 91.845 200 0 100 0 1 200 8115 8314 T. thermophila rdn A+ gene for pre-RNA, 17S rRNA, 5.8S rRNA, 26S rRNA blastn 18369 370 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
19555186 19555186 PRJNA432257_S_NODE_18336_length_331_cov_1486.945578_g17955_i0 PRJNA432257 18336 331 1486.945578 4921.78986318 Telotrochidium sp. 1 TS-2013 1349867 SAR_Eukaryotes SAR_Eukaryotes 392 1.6199999999999994e-104   NTclustered gi|519419808|gb|KF287648.1| 1349867 g17955 i0 90.878 87.3504531722054 296 22 89 4 38 330 18 311 Telotrochidium sp. 1 TS-2013 large subunit ribosomal RNA gene, partial sequence blastn 28913 392 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Telotrochidium Telotrochidium sp. 1 TS-2013
19555507 19555507 PRJNA432257_S_NODE_40576_length_250_cov_1.028169_g40195_i0 PRJNA432257 40576 250 1.0281690000000001 2.5704225 Paramecium primaurelia 5886 SAR_Eukaryotes SAR_Eukaryotes 103 1.7799999999999994e-24   NR CAD8095604.1 5886 g40195 i0 75.8 1.464 62 15 74.4 0 246 61 246 307 CAD8095604.1 unnamed protein product [Paramecium primaurelia] diamond 366 103 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
20215009 20215009 PRJNA432257_S_NODE_58896_length_217_cov_25.794444_g58515_i0 PRJNA432257 58896 217 25.794444 55.97394348 root 1 Root_unresolved Root_unresolved 337 4.72e-88   NTclustered gi|1837628855|gb|MN158348.1| 5909 g58515 i0 98.942 83.6267281105991 189 0 86 2 1 187 5398 5210 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 18147 337 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
20830962 20830962 PRJNA432257_S_NODE_17337_length_338_cov_2.312292_g16956_i0 PRJNA432257 17337 338 2.312292 7.81554696 uncultured Uronychia sp. 2487777 SAR_Eukaryotes SAR_Eukaryotes 418 2.73e-112   NTclustered gi|1516250919|gb|MK177620.1| 2487777 g16956 i0 92.256 66.4319526627219 297 20 88 1 42 338 393 100 Uncultured Uronychia sp. clone DDI141.fa small subunit ribosomal RNA gene, partial sequence blastn 22454 418 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida     uncultured Uronychia sp.
23382260 23382260 PRJNA432257_S_NODE_71819_length_201_cov_36.030488_g71438_i0 PRJNA432257 71819 201 36.030488 72.42128088 Paramecium caudatum 5885 SAR_Eukaryotes SAR_Eukaryotes 180 7.69e-41   NTclustered gi|299830252|ref|NC_014262.1| 5885 g71438 i0 88.742 0.751243781094527 151 11 74 6 32 179 26006 25859 Paramecium caudatum mitochondrion, complete genome blastn 151 180 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium caudatum
24040613 24040613 PRJNA432257_S_NODE_69079_length_204_cov_91.113772_g68698_i0 PRJNA432257 69079 204 91.113772 185.87209488 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 185 1.6799999999999994e-42   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g68698 i0 91.791 1.97058823529412 134 10 65 1 33 165 3082 2949 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 402 185 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
27265532 27265532 PRJNA432257_S_NODE_35783_length_262_cov_2.342222_g35402_i0 PRJNA432257 35783 262 2.342222 6.13662164 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 65.1 5.58e-10   NR KRW99430.1 266149 g35402 i0 44.6 0.744274809160305 65 36 74.4 0 257 63 309 373 KRW99430.1 Protein kinase-like domain [Pseudocohnilembus persalinus] diamond 195 65.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
28244212 28244212 PRJNA432257_S_NODE_61746_length_213_cov_149.409091_g61365_i0 PRJNA432257 61746 213 149.409091 318.24136383 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 47.8 4.36e-4   NR CDW87668.1 5949 g61365 i0 67.9 0.394366197183099 28 9 39.4 0 40 123 453 480 CDW87668.1 UNKNOWN [Stylonychia lemnae] diamond 84 47.8 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
29128697 29128697 PRJNA432257_S_NODE_51909_length_228_cov_1.607330_g51528_i0 PRJNA432257 51909 228 1.60733 3.6647124 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 62.4 3.44e-9   NR KRX05854.1 266149 g51528 i0 48.1 0.710526315789474 54 28 71.1 0 226 65 361 414 KRX05854.1 hypothetical protein PPERSA_03791 [Pseudocohnilembus persalinus] diamond 162 62.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
29239670 29239670 PRJNA432257_S_NODE_91249_length_183_cov_2.671233_g90868_i0 PRJNA432257 91249 183 2.671233 4.88835639 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 60.8 7.46e-10   NR KRX10209.1 266149 g90868 i0 69.6 1.52459016393443 46 14 75.4 0 43 180 1 46 KRX10209.1 hypothetical protein PPERSA_10875 [Pseudocohnilembus persalinus] diamond 279 60.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
30044129 30044129 PRJNA432257_S_NODE_38371_length_255_cov_6.082569_g37990_i0 PRJNA432257 38371 255 6.082569 15.51055095 Tetrahymena malaccensis 5901 SAR_Eukaryotes SAR_Eukaryotes 57.4 1.23e-7   NR KAL4438919.1 5901 g37990 i0 56.6 1.8 53 22 61.2 1 210 55 139 191 KAL4438919.1 hypothetical protein ABPG74_016639 [Tetrahymena malaccensis] diamond 459 57.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena malaccensis
30170472 30170472 PRJNA432257_S_NODE_71752_length_201_cov_84.719512_g71371_i0 PRJNA432257 71752 201 84.719512 170.28621912 Stentor coeruleus 5963 SAR_Eukaryotes SAR_Eukaryotes 63.2 8.36e-10   NR OMJ65684.1 5963 g71371 i0 60 1.34328358208955 45 18 67.2 0 64 198 1 45 OMJ65684.1 hypothetical protein SteCoe_37785 [Stentor coeruleus] diamond 270 63.2 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
30455311 30455311 PRJNA432257_S_NODE_51313_length_229_cov_1.432292_g50932_i0 PRJNA432257 51313 229 1.432292 3.27994868 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 50.1 7.78e-5   NR XP_001022647.2 312017 g50932 i0 40.8 1.42794759825328 49 29 64.2 0 194 48 130 178 XP_001022647.2 MFS transporter [Tetrahymena thermophila SB210] diamond 327 50.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
30486641 30486641 PRJNA432257_S_NODE_76993_length_196_cov_1.955975_g76612_i0 PRJNA432257 76993 196 1.955975 3.833711 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 69.3 4.12e-12   NR CAG9318375.1 1481888 g76612 i0 52.5 0.903061224489796 59 28 90.3 0 188 12 41 99 CAG9318375.1 unnamed protein product [Blepharisma stoltei] diamond 177 69.3 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
30597625 30597625 PRJNA432257_S_NODE_70553_length_203_cov_1.500000_g70172_i0 PRJNA432257 70553 203 1.5 3.045 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 56.2 3.46e-7   NR CAD8147233.1 43137 g70172 i0 63.2 2.80788177339901 38 14 56.2 0 198 85 272 309 CAD8147233.1 unnamed protein product [Paramecium octaurelia] diamond 570 56.2 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium octaurelia
30692512 30692512 PRJNA432257_S_NODE_47333_length_236_cov_1.296482_g46952_i0 PRJNA432257 47333 236 1.296482 3.05969752 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 117 1.01e-29   NR CAD8095604.1 5886 g46952 i0 70.5 2.97457627118644 78 23 99.2 0 1 234 77 154 CAD8095604.1 unnamed protein product [Paramecium primaurelia] diamond 702 118 0.991525423728814 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
30802499 30802499 PRJNA432257_S_NODE_85654_length_188_cov_1.033113_g85273_i0 PRJNA432257 85654 188 1.033113 1.94225244 Paramecium primaurelia 5886 SAR_Eukaryotes SAR_Eukaryotes 76.6 3.75e-15   NR CAD8102418.1 5886 g85273 i0 84.8 0.734042553191489 46 7 73.4 0 186 49 8 53 CAD8102418.1 unnamed protein product [Paramecium primaurelia] diamond 138 76.6 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
31086864 31086864 PRJNA432257_S_NODE_10435_length_402_cov_4.419178_g10074_i0 PRJNA432257 10435 402 4.419178 17.76509556 Tetrahymena utriculariae 2486642 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.0177   NR KAL4481405.1 2486642 g10074 i0 47.2 0.395522388059701 53 25 39.6 2 127 285 607 656 KAL4481405.1 hypothetical protein ABPG72_010558 [Tetrahymena utriculariae] diamond 159 45.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena utriculariae
31356361 31356361 PRJNA432257_S_NODE_58936_length_217_cov_16.161111_g58555_i0 PRJNA432257 58936 217 16.161111 35.06961087 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 46.2 0.00157   NR CAD8180050.1 43137 g58555 i0 83.3 1.65898617511521 24 4 33.2 0 184 113 356 379 CAD8180050.1 unnamed protein product [Paramecium octaurelia] diamond 360 46.2 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium octaurelia
31561352 31561352 PRJNA432257_S_NODE_59176_length_217_cov_2.383333_g58795_i0 PRJNA432257 59176 217 2.383333 5.17183261 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 51.6 1.73e-5   NR XP_001456937.1 5888 g58795 i0 33.3 7.35483870967742 69 46 95.4 0 209 3 43 111 XP_001456937.1 uncharacterized protein GSPATT00022712001 [Paramecium tetraurelia] diamond 1596 51.6 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
32193930 32193930 PRJNA432257_S_NODE_114138_length_162_cov_1.720000_g113757_i0 PRJNA432257 114138 162 1.72 2.7864 Paramecium sonneborni 65129 SAR_Eukaryotes SAR_Eukaryotes 52.4 4.17e-6   NR CAD8095918.1 65129 g113757 i0 55.8 0.796296296296296 43 16 79.6 1 145 17 99 138 CAD8095918.1 unnamed protein product [Paramecium sonneborni] diamond 129 52.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni
32193932 32193932 PRJNA432257_S_NODE_127178_length_151_cov_1.324561_g126797_i0 PRJNA432257 127178 151 1.324561 2.00008711 Paramecium aurelia 5889 SAR_Eukaryotes SAR_Eukaryotes 72 2.38e-14   NR NP_039477.1 5889 g126797 i0 94.4 0.71523178807947 36 2 71.5 0 109 2 1 36 NP_039477.1 unnamed protein product [Paramecium aurelia] diamond 108 72 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium aurelia
32478895 32478895 PRJNA432257_S_NODE_7719_length_447_cov_96.204878_g7399_i0 PRJNA432257 7719 447 96.204878 430.03580466 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 134 3.27e-33   NR XP_001030428.1 312017 g7399 i0 54.4 0.838926174496644 125 53 81.2 1 364 2 426 550 XP_001030428.1 ABC transporter family protein [Tetrahymena thermophila SB210] diamond 375 134 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
32715887 32715887 PRJNA432257_S_NODE_33720_length_268_cov_1.649351_g33339_i0 PRJNA432257 33720 268 1.649351 4.42026068 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 76.3 2.4e-15   NR CDW71975.1 5949 g33339 i0 62.7 3.34701492537313 51 19 57.1 0 248 96 48 98 CDW71975.1 60s ribosomal protein l26 [Stylonychia lemnae] diamond 897 77 0.990909090909091 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
32762416 32762416 PRJNA432257_S_NODE_15540_length_350_cov_782.929712_g15159_i0 PRJNA432257 15540 350 782.929712 2740.253992 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 127 3.51e-33   NR CDW71392.1 5949 g15159 i0 71.6 0.694285714285714 81 23 69.4 0 108 350 5 85 CDW71392.1 mitochondrial carrier protein [Stylonychia lemnae] diamond 243 127 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
32841741 32841741 PRJNA432257_S_NODE_75860_length_197_cov_2.937500_g75479_i0 PRJNA432257 75860 197 2.9375 5.786875 root 1 Root_unresolved Root_unresolved 44.7 0.00194   NR XP_001031457.1 312017 g75479 i0 36.5 1.56852791878173 52 33 79.2 0 27 182 30 81 XP_001031457.1 kazal-type proteinase inhibitor 1 [Tetrahymena thermophila SB210] diamond 309 44.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;