RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where bioproject = "PRJNA432257", tax_phylum = "Candidatus Micrarchaeota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 5 ✖

tax_phylum 1

  • Candidatus Micrarchaeota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA432257 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27581256 27581256 PRJNA432257_S_NODE_38184_length_255_cov_263.247706_g37803_i0 PRJNA432257 38184 255 263.247706 671.2816503 Candidatus Micrarchaeia archaeon 3018267 Archaea Archaea 42.7 0.0439   NR MFA6049070.1 3018267 g37803 i0 37.3 0.6 51 32 60 0 219 67 146 196 MFA6049070.1 ATP-dependent DNA ligase [Candidatus Micrarchaeia archaeon] diamond 153 42.7 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia       Candidatus Micrarchaeia archaeon
29696407 29696407 PRJNA432257_S_NODE_39410_length_252_cov_194.223256_g39029_i0 PRJNA432257 39410 252 194.223256 489.44260512 Candidatus Anstonellaceae archaeon 2886383 Archaea Archaea 128 4.14e-35   NR MEM3362628.1 2886383 g39029 i0 94.3 0.833333333333333 70 4 83.3 0 215 6 126 195 MEM3362628.1 hypothetical protein [Candidatus Anstonellaceae archaeon] diamond 210 128 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Anstonellales Candidatus Anstonellaceae   Candidatus Anstonellaceae archaeon
30581093 30581093 PRJNA432257_S_NODE_63613_length_211_cov_4.511494_g63232_i0 PRJNA432257 63613 211 4.511494 9.51925234 Candidatus Anstonellales archaeon 3058027 Archaea Archaea 130 1.7399999999999997e-35   NR MEM3373500.1 3058027 g63232 i0 93.5 0.881516587677725 62 4 88.2 0 21 206 173 234 MEM3373500.1 type II CRISPR-associated endonuclease Cas1 [Candidatus Anstonellales archaeon] diamond 186 130 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Anstonellales     Candidatus Anstonellales archaeon
30928939 30928939 PRJNA432257_S_NODE_124094_length_153_cov_2.215517_g123713_i0 PRJNA432257 124094 153 2.215517 3.38974101 Candidatus Anstonellales archaeon 3058027 Archaea Archaea 42.4 0.014   NR MEM3112620.1 3058027 g123713 i0 51.4 0.725490196078431 37 18 72.5 0 40 150 111 147 MEM3112620.1 restriction endonuclease subunit S [Candidatus Anstonellales archaeon] diamond 111 42.4 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Anstonellales     Candidatus Anstonellales archaeon
32542191 32542191 PRJNA432257_S_NODE_90499_length_183_cov_1367.623288_g90118_i0 PRJNA432257 90499 183 1367.623288 2502.75061704 Candidatus Anstonellaceae archaeon 2886383 Archaea Archaea 60.8 2.49e-9   NR MEM3362628.1 2886383 g90118 i0 100 0.491803278688525 30 0 49.2 0 43 132 91 120 MEM3362628.1 hypothetical protein [Candidatus Anstonellaceae archaeon] diamond 90 60.8 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Anstonellales Candidatus Anstonellaceae   Candidatus Anstonellaceae archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;