RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA432257" and tax_phylum = "Candidatus Kryptoniota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kryptoniota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA432257 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29191685 29191685 PRJNA432257_S_NODE_13089_length_372_cov_136.167164_g12708_i0 PRJNA432257 13089 372 136.167164 506.54185008 Candidatus Thermokryptus mobilis 1643428 Bacteria Bacteria 48.1 0.00101   NR CUU09216.1 1643428 g12708 i0 38.5 1.55645161290323 91 53 72.6 3 307 38 32 120 CUU09216.1 CRISPR-associated protein, MJ1666 family, partial [Candidatus Thermokryptus mobilis] diamond 579 48.1 1 Bacteria FCB group Pseudomonadati Candidatus Kryptoniota       Candidatus Thermokryptus Candidatus Thermokryptus mobilis
29997641 29997641 PRJNA432257_S_NODE_86991_length_186_cov_255.530201_g86610_i0 PRJNA432257 86991 186 255.530201 475.28617386 Bacteria 2 Bacteria Bacteria 60.8 4.17e-9   NR WP_092347279.1 1633643 g86610 i0 80 1.75806451612903 35 7 56.5 0 45 149 191 225 WP_092347279.1 type II restriction endonuclease [Candidatus Chrysopegis kryptomonas] diamond 327 60.8 1 Bacteria FCB group Pseudomonadati Candidatus Kryptoniota       Candidatus Chryseopegocella Candidatus Chryseopegocella kryptomonas
30882081 30882081 PRJNA432257_S_NODE_69794_length_203_cov_329.475904_g69413_i0 PRJNA432257 69794 203 329.475904 668.83608512 Pseudomonadati 3379134 Bacteria Bacteria 74.7 3.39e-14   NR WP_092347279.1 1633643 g69413 i0 64.8 3.42857142857143 54 19 79.8 0 198 37 101 154 WP_092347279.1 type II restriction endonuclease [Candidatus Chrysopegis kryptomonas] diamond 696 74.7 1 Bacteria FCB group Pseudomonadati Candidatus Kryptoniota       Candidatus Chryseopegocella Candidatus Chryseopegocella kryptomonas
32590103 32590103 PRJNA432257_S_NODE_23499_length_304_cov_187.205993_g23118_i0 PRJNA432257 23499 304 187.205993 569.10621872 Pseudomonadati 3379134 Bacteria Bacteria 135 3.9999999999999994e-37   NR WP_092347279.1 1633643 g23118 i0 63.4 3.60197368421053 101 35 97.7 1 6 302 101 201 WP_092347279.1 type II restriction endonuclease [Candidatus Chrysopegis kryptomonas] diamond 1095 135 1 Bacteria FCB group Pseudomonadati Candidatus Kryptoniota       Candidatus Chryseopegocella Candidatus Chryseopegocella kryptomonas

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;