RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA432257" and tax_phylum = "Candidatus Curtissiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Curtissiibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA432257 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8741632 8741632 PRJNA432257_S_NODE_5067_length_521_cov_209.743802_g4806_i0 PRJNA432257 5067 521 209.743802 1092.76520842 Candidatus Curtissbacteria bacterium RIFCSPLOWO2_ 2750075 Bacteria Bacteria 155 1.6799999999999996e-43   NR OGE03722.1 1797727 g4806 i0 67 0.593090211132438 103 34 59.3 0 516 208 155 257 OGE03722.1 MAG: hypothetical protein A3B51_00595 [Candidatus Curtissbacteria bacterium RIFCSPLOWO2_01_FULL_41_18] diamond 309 155 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium RIFCSPLOWO2_01_FULL_41_18
29317839 29317839 PRJNA432257_S_NODE_25209_length_297_cov_4.476923_g24828_i0 PRJNA432257 25209 297 4.476923 13.29646131 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 118 1.8399999999999998e-31   NR MBI3341803.1 2750075 g24828 i0 68.1 0.919191919191919 91 27 89.9 1 31 297 60 150 MBI3341803.1 hypothetical protein [Candidatus Curtissbacteria bacterium] diamond 273 118 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium
32193969 32193969 PRJNA432257_S_NODE_90558_length_183_cov_370.267123_g90177_i0 PRJNA432257 90558 183 370.267123 677.58883509 Candidatus Curtissbacteria bacterium RIFCSPLOWO2_ 2750075 Bacteria Bacteria 43.1 0.0121   NR OGD98086.1 1797725 g90177 i0 51.5 0.540983606557377 33 16 54.1 0 166 68 98 130 OGD98086.1 MAG: hypothetical protein A3A49_00450 [Candidatus Curtissbacteria bacterium RIFCSPLOWO2_01_FULL_38_11b] diamond 99 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium RIFCSPLOWO2_01_FULL_38_11b

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;