RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA432257" and tax_phylum = "Blastocladiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA432257 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6807219 6807219 PRJNA432257_S_NODE_3146_length_620_cov_32.339623_g2951_i0 PRJNA432257 3146 620 32.339623 200.5056626 Blastocladiomycota 451459 Fungi Fungi 223 4.33e-71   NR KAI9222637.1 64508 g2951 i0 64.8 3.07741935483871 159 56 76.9 0 530 54 1 159 KAI9222637.1 60S ribosomal protein L21-A [Blastocladiella britannica] diamond 1908 223 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
25314768 25314768 PRJNA432257_S_NODE_15180_length_353_cov_51.677215_g14799_i0 PRJNA432257 15180 353 51.677215 182.42056895 Catenariaceae 109872 Fungi Fungi 255 2.37e-63   NTclustered gi|1866582684|gb|MT730859.1| 2420186 g14799 i0 81.703 26.529745042492905 317 48 89 7 38 352 4189 4497 Catenaria sp. isolate JEL0871 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9365 255 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria sp.
26600661 26600661 PRJNA432257_S_NODE_71161_length_202_cov_3.466667_g70780_i0 PRJNA432257 71161 202 3.466667 7.00266734 Catenaria anguillulae PL171 765915 Fungi Fungi 105 9.1e-26   NR ORZ33754.1 765915 g70780 i0 75.3 3.02970297029703 73 10 98 2 200 3 19 90 ORZ33754.1 40S ribosomal protein s2 [Catenaria anguillulae PL171] diamond 612 105 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;