RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA432257", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 6 ✖

tax_kingdom 1

  • Fungi · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA432257 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1088909 1088909 PRJNA432257_S_NODE_93001_length_181_cov_2198.201389_g92620_i0 PRJNA432257 93001 181 2198.201389 3978.74451409 Eukaryota 2759 Fungi Fungi 65.8 1.97e-6   NTclustered gi|348112|gb|L16866.1|EZORGSSA 31283 g92620 i0 100 3.2817679558011 35 0 19 0 107 141 163 197 Encephalitozoon sp. small subunit ribosomal RNA gene, partial sequence blastn 594 65.8 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon sp.
4916733 4916733 PRJNA432257_S_NODE_124904_length_152_cov_8334.521739_g124523_i0 PRJNA432257 124904 152 8334.521739 12668.47304328 Eukaryota 2759 Fungi Fungi 276 6.770000000000001e-70   NTclustered gi|348113|gb|L16867.1|EZORGSSB 31283 g124523 i0 99.342 44.0592105263158 152 1 100 0 1 152 33 184 Encephalitozoon sp. small subunit ribosomal RNA gene, complete sequence blastn 6697 276 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon sp.
13842407 13842407 PRJNA432257_S_NODE_89771_length_184_cov_13.612245_g89390_i0 PRJNA432257 89771 184 13.612245 25.0465308 Nosematidae 27974 Fungi Fungi 137 4.21e-28   NTclustered gi|58532246|gb|AY741111.1| 40135 g89390 i0 83.444 77.2771739130435 151 21 81 3 36 184 562 710 Nosema bombi small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14219 137 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha bombi
14458393 14458393 PRJNA432257_S_NODE_33432_length_268_cov_221.878788_g33051_i0 PRJNA432257 33432 268 221.878788 594.63515184 Vittaforma corneae 42399 Fungi Fungi 263 1.04e-65   NTclustered gi|667639983|ref|XR_552275.1| 993615 g33051 i0 87.342 23.6716417910448 237 20 85 7 1 229 388 154 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 6344 263 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
16391141 16391141 PRJNA432257_S_NODE_126113_length_151_cov_8305.701754_g125732_i0 PRJNA432257 126113 151 8305.701754 12541.60964854 Eukaryota 2759 Fungi Fungi 274 2.42e-69   NTclustered gi|348113|gb|L16867.1|EZORGSSB 31283 g125732 i0 99.342 44.3509933774834 152 0 100 1 1 151 33 184 Encephalitozoon sp. small subunit ribosomal RNA gene, complete sequence blastn 6697 274 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon sp.
18940407 18940407 PRJNA432257_S_NODE_94335_length_180_cov_960.272727_g93954_i0 PRJNA432257 94335 180 960.272727 1728.4909086 Eukaryota 2759 Fungi Fungi 115 1.92e-21   NTclustered gi|348112|gb|L16866.1|EZORGSSA 31283 g93954 i0 98.462 29.9333333333333 65 1 36 0 107 171 163 227 Encephalitozoon sp. small subunit ribosomal RNA gene, partial sequence blastn 5388 115 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;