RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA432257", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA432257 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29759771 29759771 PRJNA432257_S_NODE_45731_length_239_cov_1.787129_g45350_i0 PRJNA432257 45731 239 1.787129 4.27123831 Rozella allomycis CSF55 988480 Fungi Fungi 77.4 2.2e-14   NR EPZ34328.1 988480 g45350 i0 65.5 2.18410041841004 58 20 72.8 0 64 237 1 58 EPZ34328.1 Exportin-1-like protein [Rozella allomycis CSF55] diamond 522 77.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30771081 30771081 PRJNA432257_S_NODE_5754_length_498_cov_4.715835_g5484_i0 PRJNA432257 5754 498 4.715835 23.4848583 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 75.5 1.52e-12   NR PJF20101.1 1246581 g5484 i0 35.8 0.72289156626506 120 68 72.3 2 70 429 261 371 PJF20101.1 Pelota-like protein [Paramicrosporidium saccamoebae] diamond 360 75.5 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;