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contig_metadata

9 rows where bioproject = "PRJNA432257", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 9 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 9 ✖

bioproject 1

  • PRJNA432257 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26949141 26949141 PRJNA432257_S_NODE_17162_length_339_cov_3.725166_g16781_i0 PRJNA432257 17162 339 3.725166 12.62831274 Candidatus Omnitrophica bacterium ADurb.Bin2 2035772 Bacteria Bacteria 136 5.9e-38   NR OQB11197.1 1852852 g16781 i0 86.1 1.39823008849558 79 11 69.9 0 296 60 1 79 OQB11197.1 MAG: LexA repressor [Candidatus Omnitrophica bacterium ADurb.Bin205] diamond 474 136 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophica bacterium ADurb.Bin205
27107238 27107238 PRJNA432257_S_NODE_87402_length_186_cov_10.885906_g87021_i0 PRJNA432257 87402 186 10.885906 20.24778516 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 68.6 9.6e-12   NR MCX7927272.1 2035772 g87021 i0 62 0.806451612903226 50 18 80.6 1 152 3 45 93 MCX7927272.1 glycosyltransferase [Candidatus Omnitrophota bacterium] diamond 150 68.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27408572 27408572 PRJNA432257_S_NODE_92743_length_182_cov_1.689655_g92362_i0 PRJNA432257 92743 182 1.689655 3.0751721 Bacteria 2 Bacteria Bacteria 61.2 3.3e-9   NR OGW80783.1 1801823 g92362 i0 73.2 1.33516483516484 41 11 67.6 0 7 129 224 264 OGW80783.1 MAG: ATP synthase F0 subunit A [Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_51_18] diamond 243 61.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_51_18
27960161 27960161 PRJNA432257_S_NODE_3305_length_608_cov_89.408056_g3102_i0 PRJNA432257 3305 608 89.408056 543.60098048 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 198 1.08e-57   NR HTZ42167.1 2035772 g3102 i0 69.2 0.65625 133 41 65.6 0 194 592 1 133 HTZ42167.1 RNase J family beta-CASP ribonuclease [Candidatus Omnitrophota bacterium] diamond 399 198 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28402256 28402256 PRJNA432257_S_NODE_68606_length_205_cov_2.285714_g68225_i0 PRJNA432257 68606 205 2.285714 4.6857137 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 58.5 4.11e-8   NR MDD3906222.1 2035772 g68225 i0 60.5 4.27317073170732 43 17 62.9 0 76 204 181 223 MDD3906222.1 DNA methyltransferase [Candidatus Omnitrophota bacterium] diamond 876 58.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28497074 28497074 PRJNA432257_S_NODE_19687_length_323_cov_785.216783_g19306_i0 PRJNA432257 19687 323 785.216783 2536.25020909 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 84 1.84e-16   NR MDD5355771.1 2035772 g19306 i0 60.3 0.631578947368421 68 27 63.2 0 15 218 289 356 MDD5355771.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 204 84 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29728101 29728101 PRJNA432257_S_NODE_80030_length_193_cov_1.679487_g79649_i0 PRJNA432257 80030 193 1.679487 3.24140991 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 107 4.04e-26   NR MBL8013008.1 2035772 g79649 i0 87.3 0.854922279792746 55 7 85.5 0 170 6 174 228 MBL8013008.1 glycosyltransferase [Candidatus Omnitrophota bacterium] diamond 165 107 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31023703 31023703 PRJNA432257_S_NODE_68075_length_205_cov_196.142857_g67694_i0 PRJNA432257 68075 205 196.142857 402.09285685 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 77.8 4.4e-16   NR MFA5059533.1 2035772 g67694 i0 63 7.21463414634146 54 20 79 0 203 42 52 105 MFA5059533.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 1479 77.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32225660 32225660 PRJNA432257_S_NODE_82558_length_190_cov_164.196078_g82177_i0 PRJNA432257 82558 190 164.196078 311.9725482 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 55.8 4.46e-7   NR MFH1782960.1 2035772 g82177 i0 61.7 1.46842105263158 47 16 74.2 1 142 2 789 833 MFH1782960.1 filamentous hemagglutinin N-terminal domain-containing protein [Candidatus Omnitrophota bacterium] diamond 279 55.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;