RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where bioproject = "PRJNA432257", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 13 ✖

tax_clade 1

  • Discoba · 13 ✖

bioproject 1

  • PRJNA432257 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9357722 9357722 PRJNA432257_S_NODE_39208_length_253_cov_4.217593_g38827_i0 PRJNA432257 39208 253 4.217593 10.67051029 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 52.8 0.023   NTclustered gi|2031940106|emb|OD957682.1| 5763 g38827 i0 90.244 0.162055335968379 41 3 16 1 22 62 9433 9394 Naegleria fowleri Karachi_NF001 strain blastn 41 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
11908738 11908738 PRJNA432257_S_NODE_65110_length_209_cov_9.093023_g64729_i0 PRJNA432257 65110 209 9.093023 19.00441807 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 52.8 0.018   NTclustered gi|2119416215|ref|XM_044699845.1| 51637 g64729 i0 94.118 0.162679425837321 34 2 16 0 19 52 194 227 Naegleria lovaniensis uncharacterized protein (C9374_009636), partial mRNA blastn 34 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
15732343 15732343 PRJNA432257_S_NODE_46073_length_238_cov_10.587065_g45692_i0 PRJNA432257 46073 238 10.587065 25.1972147 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 89.8 1.63e-13   NTclustered gi|2119426825|ref|XM_044701175.1| 5763 g45692 i0 83.333 0.80672268907563 96 16 40 0 74 169 442 537 Naegleria fowleri uncharacterized protein (FDP41_010834), partial mRNA blastn 192 89.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
18280863 18280863 PRJNA432257_S_NODE_15475_length_351_cov_12.130573_g15094_i0 PRJNA432257 15475 351 12.130573 42.57831123 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 54.7 0.009   NTclustered gi|2119443025|ref|XM_044704881.1| 5763 g15094 i0 100 0.165242165242165 29 0 8 0 44 72 150 178 Naegleria fowleri uncharacterized protein (FDP41_001761), partial mRNA blastn 58 54.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
26949186 26949186 PRJNA432257_S_NODE_98922_length_177_cov_2.878571_g98541_i0 PRJNA432257 98922 177 2.878571 5.09507067 Acrasis kona 1008807 Heterolobosea other_Eukaryota 100 9.429999999999999e-25   NR KAL0488347.1 1008807 g98541 i0 94.4 0.915254237288136 54 3 91.5 0 176 15 130 183 KAL0488347.1 irditoxin subunit A [Acrasis kona] diamond 162 100 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
27518205 27518205 PRJNA432257_S_NODE_78803_length_194_cov_2.617834_g78422_i0 PRJNA432257 78803 194 2.617834 5.07859796 Acrasis kona 1008807 Heterolobosea other_Eukaryota 119 3.3699999999999997e-32   NR KAL0488347.1 1008807 g78422 i0 84.4 0.989690721649485 64 10 99 0 192 1 82 145 KAL0488347.1 irditoxin subunit A [Acrasis kona] diamond 192 119 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28054847 28054847 PRJNA432257_S_NODE_58165_length_218_cov_25.685083_g57784_i0 PRJNA432257 58165 218 25.685083 55.99348094 Acrasis kona 1008807 Heterolobosea other_Eukaryota 88.6 4.81e-19   NR KAL0480143.1 1008807 g57784 i0 65.5 0.798165137614679 58 20 79.8 0 4 177 241 298 KAL0480143.1 cathepsin [Acrasis kona] diamond 174 88.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28686704 28686704 PRJNA432257_S_NODE_91067_length_183_cov_8.712329_g90686_i0 PRJNA432257 91067 183 8.712329 15.94356207 Acrasis kona 1008807 Heterolobosea other_Eukaryota 70.1 3.68e-12   NR KAL0477662.1 1008807 g90686 i0 86.1 0.590163934426229 36 5 59 0 172 65 462 497 KAL0477662.1 equilibrative nucleotide transporter [Acrasis kona] diamond 108 70.1 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
29412478 29412478 PRJNA432257_S_NODE_24169_length_302_cov_1.471698_g23788_i0 PRJNA432257 24169 302 1.471698 4.44452796 Acrasis kona 1008807 Heterolobosea other_Eukaryota 78.2 6.16e-16   NR KAL0487907.1 1008807 g23788 i0 76 1.49006622516556 75 18 74.5 0 225 1 3 77 KAL0487907.1 hypothetical protein AKO1_008896 [Acrasis kona] diamond 450 78.2 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30518151 30518151 PRJNA432257_S_NODE_91753_length_182_cov_448.937931_g91372_i0 PRJNA432257 91753 182 448.937931 817.06703442 Acrasis kona 1008807 Heterolobosea other_Eukaryota 72 4.06e-14   NR KAL0480702.1 1008807 g91372 i0 66 2.32417582417582 47 16 77.5 0 143 3 78 124 KAL0480702.1 plsX [Acrasis kona] diamond 423 72 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31229498 31229498 PRJNA432257_S_NODE_43715_length_243_cov_2.412621_g43334_i0 PRJNA432257 43715 243 2.412621 5.86266903 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 92 1.56e-19   NR KAL0486837.1 1008807 g43334 i0 65.6 13.1111111111111 64 22 79 0 223 32 480 543 KAL0486837.1 proline dehydrogenase [Acrasis kona] diamond 3186 92 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32035677 32035677 PRJNA432257_S_NODE_51318_length_229_cov_1.421875_g50937_i0 PRJNA432257 51318 229 1.421875 3.25609375 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 84 1.49e-17   NR NP_066534.1 5762 g50937 i0 55.8 2.8296943231441 77 32 98.3 1 4 228 91 167 NP_066534.1 ATP synthase F0 subunit 6 [Naegleria gruberi] diamond 648 84 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32098885 32098885 PRJNA432257_S_NODE_110198_length_166_cov_1.813953_g109817_i0 PRJNA432257 110198 166 1.813953 3.01116198 Acrasis kona 1008807 Heterolobosea other_Eukaryota 99.8 3.32e-23   NR KAL0485441.1 1008807 g109817 i0 94.1 0.921686746987952 51 3 92.2 0 1 153 316 366 KAL0485441.1 cell cycle control protein 50A [Acrasis kona] diamond 153 99.8 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;