RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA431371" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA431371 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10632399 10632399 PRJNA431371_P_NODE_4849_length_539_cov_2.633047_g4776_i0 PRJNA431371 4849 539 2.633047 14.19212333 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 595 1.9499999999999995e-165   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g4776 i0 87.645 843.671614100185 518 56 96 6 4 516 5032721 5032207 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 454739 595 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
17005302 17005302 PRJNA431371_P_NODE_14994_length_330_cov_1.198444_g14921_i0 PRJNA431371 14994 330 1.198444 3.9548652 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 67 3.05e-10   NR MFN8612103.1 3107663 g14921 i0 50.8 1.82727272727273 63 31 57.3 0 253 65 155 217 MFN8612103.1 DEAD/DEAH box helicase [Vulcanimicrobiota bacterium] diamond 603 67 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;