RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA431371", tax_phylum = "Promethearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Promethearchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA431371 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32573755 32573755 PRJNA431371_P_NODE_22119_length_270_cov_1.954315_g22046_i0 PRJNA431371 22119 270 1.954315 5.2766505 Candidatus Lokiarchaeum ossiferum 2951803 Archaea Archaea 109 2.43e-26   NR UYP48722.1 2951803 g22046 i0 62.9 0.988888888888889 89 30 98.9 1 2 268 242 327 UYP48722.1 hypothetical protein NEF87_005007 [Candidatus Lokiarchaeum ossiferum] diamond 267 109 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia Promethearchaeales Promethearchaeaceae Candidatus Lokiarchaeum Candidatus Lokiarchaeum ossiferum
32731030 32731030 PRJNA431371_P_NODE_8420_length_427_cov_1.087571_g8347_i0 PRJNA431371 8420 427 1.087571 4.64392817 Promethearchaeota archaeon 2053489 Archaea Archaea 129 5.54e-33   NR UCC18908.1 2053489 g8347 i0 49.3 1.9672131147541 140 71 98.4 0 427 8 159 298 UCC18908.1 MAG: ACR3 family arsenite efflux transporter [Promethearchaeota archaeon] diamond 840 129 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;