RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA431371" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA431371 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12566874 12566874 PRJNA431371_P_NODE_31830_length_245_cov_0.895349_g31757_i0 PRJNA431371 31830 245 0.895349 2.19360505 Minisyncoccota bacterium 2053589 Bacteria Bacteria 124 1.0500000000000001e-30   NR HUZ07743.1 2053589 g31757 i0 72.8 15.869387755102 81 22 99.2 0 243 1 587 667 HUZ07743.1 aminomethyl-transferring glycine dehydrogenase [Candidatus Paceibacterota bacterium] diamond 3888 124 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30518070 30518070 PRJNA431371_P_NODE_12293_length_360_cov_2.087108_g12220_i0 PRJNA431371 12293 360 2.087108 7.5135888 Minisyncoccota bacterium 2053589 Bacteria Bacteria 44.7 0.0119   NR MFA5166872.1 2053589 g12220 i0 27.2 1.575 92 61 75 4 320 51 6 93 MFA5166872.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 567 44.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32415454 32415454 PRJNA431371_P_NODE_36239_length_241_cov_0.916667_g36166_i0 PRJNA431371 36239 241 0.916667 2.20916747 Minisyncoccota bacterium 2053589 Bacteria Bacteria 45.1 0.00303   NR HYD93449.1 2053589 g36166 i0 35.9 0.796680497925311 64 37 75.9 2 218 36 103 165 HYD93449.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 192 45.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;