RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA431371" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA431371 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28875784 28875784 PRJNA431371_P_NODE_19268_length_291_cov_1.412844_g19195_i0 PRJNA431371 19268 291 1.412844 4.11137604 Fidelibacterota bacterium 2026760 Bacteria Bacteria 68.9 1.67e-11   NR MCK4530639.1 2026760 g19195 i0 46.1 0.917525773195876 89 43 86.6 1 287 36 164 252 MCK4530639.1 ZIP family metal transporter [Fidelibacterota bacterium] diamond 267 68.9 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32320742 32320742 PRJNA431371_P_NODE_17539_length_306_cov_1.896996_g17466_i0 PRJNA431371 17539 306 1.896996 5.80480776 Fidelibacterota bacterium 2026760 Bacteria Bacteria 57 6.86e-7   NR MBD31228.1 2026760 g17466 i0 45.7 3.13725490196078 70 34 64.7 1 106 303 48 117 MBD31228.1 hypothetical protein [Fidelibacterota bacterium] diamond 960 57 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;