RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA431371" and tax_phylum = "Chlorobiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlorobiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA431371 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29523816 29523816 PRJNA431371_P_NODE_9250_length_409_cov_1.235119_g9177_i0 PRJNA431371 9250 409 1.235119 5.05163671 Pseudomonadati 3379134 Bacteria Bacteria 118 1.01e-30   NR MBA4250617.1 2067991 g9177 i0 61.8 19.1735941320293 102 37 73.3 2 1 300 77 178 MBA4250617.1 dCTP deaminase [Chlorobiaceae bacterium] diamond 7842 119 0.991596638655462 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chlorobiaceae   Chlorobiaceae bacterium
32888205 32888205 PRJNA431371_P_NODE_14940_length_330_cov_2.260700_g14867_i0 PRJNA431371 14940 330 2.2607 7.46031 Chlorobiota bacterium 2268192 Bacteria Bacteria 53.9 1.18e-5   NR MBL7987283.1 2268192 g14867 i0 35.5 0.690909090909091 76 45 69.1 2 310 83 498 569 MBL7987283.1 DUF262 domain-containing protein [Chlorobiota bacterium] diamond 228 53.9 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;