RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA431371" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA431371 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18280071 18280071 PRJNA431371_P_NODE_5075_length_529_cov_2.379386_g5002_i0 PRJNA431371 5075 529 2.379386 12.58695194 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 457 9.409999999999999e-124   NTclustered gi|756877536|ref|NC_026310.1| 372086 g5002 i0 83.235 0.958412098298677 507 76 95 8 29 529 25153 25656 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 507 457 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
22765036 22765036 PRJNA431371_P_NODE_8018_length_436_cov_1.964187_g7945_i0 PRJNA431371 8018 436 1.964187 8.56385532 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 247 1.02e-79   NR MES1915178.1 1215613 g7945 i0 76.6 25.8577981651376 145 34 99.8 0 436 2 109 253 MES1915178.1 hypothetical protein [Cercozoa sp. M6MM] diamond 11274 247 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;