contig_metadata
9 rows where bioproject = "PRJNA431371", tax_kingdom = "Pseudomonadati" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26743687 | 26743687 | PRJNA431371_P_NODE_20001_length_286_cov_1.342723_g19928_i0 | PRJNA431371 | 20001 | 286 | 1.3427230000000001 | 3.84018778 | Treponema | 157 | Bacteria | Bacteria | 115 | 1.01e-27 | NR | WP_371922239.1 | 2563668 | g19928 | i0 | 61.8 | 2.82167832167832 | 89 | 33 | 93.4 | 1 | 12 | 278 | 351 | 438 | WP_371922239.1 hypothetical protein [Treponema sp. OMZ 799] | diamond | 807 | 115 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 799 | ||
| 27044156 | 27044156 | PRJNA431371_P_NODE_5622_length_508_cov_1.528736_g5549_i0 | PRJNA431371 | 5622 | 508 | 1.528736 | 7.76597888 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 47.4 | 0.0113 | NR | MBT3275166.1 | 2026792 | g5549 | i0 | 28.1 | 0.673228346456693 | 114 | 68 | 60.2 | 4 | 327 | 22 | 6 | 117 | MBT3275166.1 hypothetical protein [Spirochaetales bacterium] | diamond | 342 | 47.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 27360404 | 27360404 | PRJNA431371_P_NODE_1983_length_748_cov_2.023704_g1912_i0 | PRJNA431371 | 1983 | 748 | 2.023704 | 15.13730592 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 58.5 | 2.98e-6 | NR | MDK2817934.1 | 2202144 | g1912 | i0 | 52.9 | 0.204545454545455 | 51 | 24 | 20.5 | 0 | 155 | 3 | 60 | 110 | MDK2817934.1 ankyrin repeat domain-containing protein [Spirochaetota bacterium] | diamond | 153 | 58.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 28275808 | 28275808 | PRJNA431371_P_NODE_966_length_943_cov_1.362069_g906_i0 | PRJNA431371 | 966 | 943 | 1.362069 | 12.84431067 | Treponema sp. | 166 | Bacteria | Bacteria | 52.8 | 0.00166 | NR | MDR0300936.1 | 166 | g906 | i0 | 25.5 | 0.747613997879109 | 153 | 106 | 46.8 | 5 | 441 | 881 | 770 | 920 | MDR0300936.1 leucine-rich repeat protein [Treponema sp.] | diamond | 705 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28718044 | 28718044 | PRJNA431371_P_NODE_28827_length_248_cov_0.880000_g28754_i0 | PRJNA431371 | 28827 | 248 | 0.88 | 2.1824 | Treponema sp. | 166 | Bacteria | Bacteria | 76.6 | 1.51e-14 | NR | MCR5494658.1 | 166 | g28754 | i0 | 86 | 1.04032258064516 | 43 | 6 | 52 | 0 | 131 | 3 | 1 | 43 | MCR5494658.1 protein-glutamate O-methyltransferase CheR [Treponema sp.] | diamond | 258 | 76.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 29744544 | 29744544 | PRJNA431371_P_NODE_19030_length_293_cov_1.400000_g18957_i0 | PRJNA431371 | 19030 | 293 | 1.4 | 4.102 | Spirochaetia | 203692 | Bacteria | Bacteria | 45.8 | 0.00535 | NR | WP_002994148.1 | 28184 | g18957 | i0 | 40 | 1.62798634812287 | 55 | 27 | 56.3 | 1 | 292 | 128 | 44 | 92 | WP_002994148.1 ankyrin repeat domain-containing protein [Leptospira weilii] | diamond | 477 | 46.2 | 0.991341991341991 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira weilii | ||
| 30455266 | 30455266 | PRJNA431371_P_NODE_16133_length_319_cov_2.178862_g16060_i0 | PRJNA431371 | 16133 | 319 | 2.178862 | 6.95056978 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 142 | 3.76e-39 | NR | MBP7281757.1 | 2026757 | g16060 | i0 | 57.8 | 1.92789968652038 | 102 | 43 | 95.9 | 0 | 316 | 11 | 72 | 173 | MBP7281757.1 hypothetical protein [Leptospiraceae bacterium] | diamond | 615 | 142 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 30549613 | 30549613 | PRJNA431371_P_NODE_27693_length_249_cov_0.875000_g27620_i0 | PRJNA431371 | 27693 | 249 | 0.875 | 2.17875 | Treponema lecithinolyticum | 53418 | Bacteria | Bacteria | 98.2 | 1.22e-21 | NR | WP_021686488.1 | 53418 | g27620 | i0 | 55.6 | 0.975903614457831 | 81 | 36 | 97.6 | 0 | 2 | 244 | 60 | 140 | WP_021686488.1 methyl-accepting chemotaxis protein [Treponema lecithinolyticum] | diamond | 243 | 98.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema lecithinolyticum | ||
| 32667874 | 32667874 | PRJNA431371_P_NODE_35820_length_241_cov_0.916667_g35747_i0 | PRJNA431371 | 35820 | 241 | 0.916667 | 2.20916747 | Treponema sp. | 166 | Bacteria | Bacteria | 150 | 5.72e-41 | NR | MCR5496154.1 | 166 | g35747 | i0 | 93.8 | 3.98340248962656 | 80 | 5 | 99.6 | 0 | 1 | 240 | 92 | 171 | MCR5496154.1 sodium/proline symporter PutP [Treponema sp.] | diamond | 960 | 150 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;