RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA431371", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA431371 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4254894 4254894 PRJNA431371_P_NODE_13824_length_342_cov_0.858736_g13751_i0 PRJNA431371 13824 342 0.858736 2.93687712 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 141 3.31e-36   NR PJF17769.1 1246581 g13751 i0 70.8 0.991228070175439 113 29 99.1 1 2 340 48 156 PJF17769.1 RuvB-like helicase [Paramicrosporidium saccamoebae] diamond 339 141 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
13182225 13182225 PRJNA431371_P_NODE_6731_length_470_cov_3.992443_g6658_i0 PRJNA431371 6731 470 3.992443 18.7644821 Eukaryota 2759 Fungi Fungi 231 3.01e-74   NR PJF17524.1 1246581 g6658 i0 74.2 2.92340425531915 151 39 96.4 0 470 18 56 206 PJF17524.1 hypothetical protein PSACC_02620 [Paramicrosporidium saccamoebae] diamond 1374 231 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
19554128 19554128 PRJNA431371_P_NODE_24816_length_251_cov_0.865169_g24743_i0 PRJNA431371 24816 251 0.865169 2.17157419 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 147 5.1099999999999996e-42   NR PJF20109.1 1246581 g24743 i0 85.4 0.9800796812749 82 12 98 0 2 247 83 164 PJF20109.1 hypothetical protein PSACC_00087 [Paramicrosporidium saccamoebae] diamond 246 147 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
30486595 30486595 PRJNA431371_P_NODE_34333_length_243_cov_0.905882_g34260_i0 PRJNA431371 34333 243 0.905882 2.20129326 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 91.3 3.21e-19   NR PJF19845.1 1246581 g34260 i0 54.3 1 81 37 100 0 1 243 191 271 PJF19845.1 Phosphoglucose isomerase [Paramicrosporidium saccamoebae] diamond 243 91.3 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;