RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA431371", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA431371 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5531645 5531645 PRJNA431371_P_NODE_13465_length_345_cov_1.981618_g13392_i0 PRJNA431371 13465 345 1.981618 6.8365821 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 132 1.58e-36   NR MFN3682597.1 2682144 g13392 i0 62.9 3.46086956521739 97 35 83.5 1 345 58 79 175 MFN3682597.1 glutathione peroxidase [Fimbriimonadaceae bacterium] diamond 1194 132 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
32067159 32067159 PRJNA431371_P_NODE_16558_length_315_cov_1.590909_g16485_i0 PRJNA431371 16558 315 1.590909 5.01136335 Capsulimonadales bacterium 2971800 Bacteria Bacteria 43.9 0.0333   NR MDX1933652.1 2971800 g16485 i0 33 0.952380952380952 100 59 94.3 4 301 5 568 660 MDX1933652.1 PQQ-binding-like beta-propeller repeat protein [Capsulimonadales bacterium] diamond 300 43.9 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales     Capsulimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;