RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA431371", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA431371 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24654772 24654772 PRJNA431371_P_NODE_3820_length_591_cov_1.631274_g3747_i0 PRJNA431371 3820 591 1.631274 9.64082934 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 133 7.3699999999999995e-34   NR ETO36503.1 46433 g3747 i0 42.1 1.6243654822335 159 88 80.2 3 474 1 160 315 ETO36503.1 hypothetical protein RFI_00558 [Reticulomyxa filosa] diamond 960 133 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27297016 27297016 PRJNA431371_P_NODE_1303_length_861_cov_4.694162_g1240_i0 PRJNA431371 1303 861 4.694162 40.41673482 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 46.6 0.0183   NR ETO30768.1 46433 g1240 i0 34.7 0.250871080139373 72 46 24.7 1 30 242 1 72 ETO30768.1 protein kinase family protein, partial [Reticulomyxa filosa] diamond 216 46.6 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;