RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where bioproject = "PRJNA431371", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 8 ✖

tax_clade 1

  • Metamonada · 8 ✖

bioproject 1

  • PRJNA431371 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
427939 427939 PRJNA431371_P_NODE_11481_length_371_cov_1.046980_g11408_i0 PRJNA431371 11481 371 1.04698 3.8842958 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 62.1 5.86e-5   NTclustered gi|2794962576|ref|XM_067873669.1| 2049356 g11408 i0 100 4.21832884097035 33 0 9 0 37 69 9961 9993 Monocercomonoides exilis uncharacterized protein (MONOS_3655), partial mRNA blastn 1565 62.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
19554115 19554115 PRJNA431371_P_NODE_2416_length_696_cov_1.730337_g2343_i0 PRJNA431371 2416 696 1.730337 12.04314552 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.019   NTclustered gi|2794952320|ref|XM_067877861.1| 2049356 g2343 i0 96.97 0.0474137931034483 33 0 5 1 243 275 1007 1038 Monocercomonoides exilis uncharacterized protein (MONOS_7528), mRNA blastn 33 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
26727184 26727184 PRJNA431371_P_NODE_2281_length_711_cov_10.713166_g2208_i0 PRJNA431371 2281 711 10.713166 76.17061026 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 59.7 2.83e-6   NR KAJ4456615.1 342808 g2208 i0 26.1 0.645569620253165 153 93 62.4 4 146 589 337 474 KAJ4456615.1 putative C1 family cathepsin B20 [Paratrimastix pyriformis] diamond 459 59.7 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
27455188 27455188 PRJNA431371_P_NODE_7003_length_462_cov_3.251928_g6930_i0 PRJNA431371 7003 462 3.251928 15.02390736 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 56.2 7.05e-6   NR KAJ4456615.1 342808 g6930 i0 35.1 0.5 77 45 47.4 2 271 53 397 472 KAJ4456615.1 putative C1 family cathepsin B20 [Paratrimastix pyriformis] diamond 231 56.2 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
29412447 29412447 PRJNA431371_P_NODE_1689_length_789_cov_2.808659_g1618_i0 PRJNA431371 1689 789 2.808659 22.16031951 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 132 2.4199999999999997e-31   NR KAJ4455863.1 342808 g1618 i0 41.6 0.931558935361217 245 125 89.4 6 2 706 295 531 KAJ4455863.1 putative glycine-rich RNA binding protein [Paratrimastix pyriformis] diamond 735 132 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
29570318 29570318 PRJNA431371_P_NODE_18930_length_294_cov_1.393665_g18857_i0 PRJNA431371 18930 294 1.393665 4.0973751 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 90.1 9.66e-21   NR KAJ4461766.1 342808 g18857 i0 53.8 1.6734693877551 78 35 79.6 1 4 237 31 107 KAJ4461766.1 putative Splicing factor 3B subunit 6 [Paratrimastix pyriformis] diamond 492 90.1 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
30012708 30012708 PRJNA431371_P_NODE_12671_length_355_cov_1.599291_g12598_i0 PRJNA431371 12671 355 1.599291 5.67748305 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 61.6 6.32e-9   NR KAJ4461763.1 342808 g12598 i0 37.1 0.752112676056338 89 54 73.5 2 47 307 81 169 KAJ4461763.1 hypothetical protein PAPYR_1904 [Paratrimastix pyriformis] diamond 267 61.6 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
31909061 31909061 PRJNA431371_P_NODE_12817_length_353_cov_1.907143_g12744_i0 PRJNA431371 12817 353 1.907143 6.73221479 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 90.1 1.17e-18   NR KAK2964362.1 2049346 g12744 i0 47.9 1.01133144475921 119 53 97.7 3 6 350 126 239 KAK2964362.1 putative Serine/threonine-protein phosphatase [Blattamonas nauphoetae] diamond 357 90.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;