contig_metadata
2 rows where bioproject = "PRJNA431371", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26854527 | 26854527 | PRJNA431371_P_NODE_5881_length_498_cov_1.722353_g5808_i0 | PRJNA431371 | 5881 | 498 | 1.722353 | 8.57731794 | Candidatus Methylomirabilota bacterium | 2072417 | Bacteria | Bacteria | 45.8 | 0.0278 | NR | MEK6529246.1 | 2072417 | g5808 | i0 | 29.4 | 0.759036144578313 | 126 | 89 | 75.9 | 0 | 80 | 457 | 116 | 241 | MEK6529246.1 redox-regulated ATPase YchF [Candidatus Methylomirabilota bacterium] | diamond | 378 | 45.8 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Methylomirabilota | Candidatus Methylomirabilota bacterium | ||||||
| 27881907 | 27881907 | PRJNA431371_P_NODE_18225_length_300_cov_1.356828_g18152_i0 | PRJNA431371 | 18225 | 300 | 1.356828 | 4.070484 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 146 | 1.03e-39 | NR | HTO82366.1 | 2072417 | g18152 | i0 | 73.7 | 2.99 | 99 | 26 | 99 | 0 | 297 | 1 | 238 | 336 | HTO82366.1 aspartate aminotransferase family protein [Candidatus Methylomirabilota bacterium] | diamond | 897 | 146 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Methylomirabilota | Candidatus Methylomirabilota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;