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contig_metadata

7 rows where bioproject = "PRJNA431371", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 7 ✖

tax_clade 1

  • Apusozoa · 7 ✖

bioproject 1

  • PRJNA431371 · 7 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20829771 20829771 PRJNA431371_P_NODE_18877_length_294_cov_2.303167_g18804_i0 PRJNA431371 18877 294 2.303167 6.77131098 Thecamonas trahens 529818 Root_unresolved Root_unresolved 54.7 0.008   NTclustered gi|923134970|ref|XM_013905497.1| 461836 g18804 i0 100 0.193877551020408 29 0 10 0 255 283 1916 1944 Thecamonas trahens ATCC 50062 STE/STE11 protein kinase (AMSG_02409), partial mRNA blastn 57 54.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26886112 26886112 PRJNA431371_P_NODE_11901_length_365_cov_1.318493_g11828_i0 PRJNA431371 11901 365 1.318493 4.81249945 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 58.9 3.09e-7   NR XP_013755013.1 461836 g11828 i0 32.6 0.731506849315068 89 51 73.2 1 271 5 173 252 XP_013755013.1 uncharacterized protein AMSG_12227 [Thecamonas trahens ATCC 50062] diamond 267 58.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26886136 26886136 PRJNA431371_P_NODE_6321_length_484_cov_1.428224_g6248_i0 PRJNA431371 6321 484 1.428224 6.91260416 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 85.1 3.85e-16   NR XP_013754609.1 461836 g6248 i0 41.9 0.576446280991736 93 53 57.6 1 7 285 68 159 XP_013754609.1 uncharacterized protein AMSG_09209 [Thecamonas trahens ATCC 50062] diamond 279 85.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29145207 29145207 PRJNA431371_P_NODE_7869_length_440_cov_1.258856_g7796_i0 PRJNA431371 7869 440 1.258856 5.5389664 root 1 Root_unresolved Root_unresolved 53.9 3.92e-5   NR XP_013754026.1 461836 g7796 i0 36.4 3.59318181818182 99 61 67.5 1 3 299 374 470 XP_013754026.1 AtuA protein [Thecamonas trahens ATCC 50062] diamond 1581 53.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29570313 29570313 PRJNA431371_P_NODE_11230_length_374_cov_2.737542_g11157_i0 PRJNA431371 11230 374 2.737542 10.23840708 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 174 4.24e-50   NR XP_013753190.1 461836 g11157 i0 61.2 1.11497326203209 139 39 99.5 2 372 1 224 362 XP_013753190.1 uncharacterized protein AMSG_12392 [Thecamonas trahens ATCC 50062] diamond 417 174 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29981025 29981025 PRJNA431371_P_NODE_691_length_1046_cov_1.431655_g634_i0 PRJNA431371 691 1046 1.431655 14.9751113 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 155 1.1e-37   NR XP_013753710.1 461836 g634 i0 34.9 1.83269598470363 315 187 89.2 7 1025 93 3955 4255 XP_013753710.1 dynein-1-alpha heavy chain [Thecamonas trahens ATCC 50062] diamond 1917 155 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30170411 30170411 PRJNA431371_P_NODE_232_length_1470_cov_2.076593_g194_i0 PRJNA431371 232 1470 2.076593 30.5259171 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 218 5.2e-59   NR XP_013754426.1 461836 g194 i0 47.4 0.508163265306122 249 123 49.8 4 734 3 8 253 XP_013754426.1 uncharacterized protein AMSG_08886 [Thecamonas trahens ATCC 50062] diamond 747 218 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;