RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA429937" and tax_phylum = "Xenacoelomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Xenacoelomorpha · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA429937 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
426551 426551 PRJNA429937_P_NODE_34441_length_618_cov_2.567063_g21316_i0 PRJNA429937 34441 618 2.567063 15.86444934 Haploposthia rubropunctata 2183133 Xenacoelomorpha other_Eukaryota 84.2 2.17e-11   NTclustered gi|2065292245|gb|MZ520447.1| 2183133 g21316 i0 88.571 9.8284789644013 70 7 11 1 30 99 1560 1492 Haploposthia rubropunctata isolate UJ13-503 large subunit ribosomal RNA gene, partial sequence blastn 6074 84.2 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Haploposthiidae Haploposthia Haploposthia rubropunctata
9355002 9355002 PRJNA429937_P_NODE_48368_length_511_cov_2.821577_g31465_i0 PRJNA429937 48368 511 2.821577 14.41825847 Haploposthia rubropunctata 2183133 Xenacoelomorpha other_Eukaryota 84.2 1.77e-11   NTclustered gi|2065292245|gb|MZ520447.1| 2183133 g31465 i0 88.571 11.1565557729941 70 7 14 1 154 223 1492 1560 Haploposthia rubropunctata isolate UJ13-503 large subunit ribosomal RNA gene, partial sequence blastn 5701 84.2 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Haploposthiidae Haploposthia Haploposthia rubropunctata
10630925 10630925 PRJNA429937_P_NODE_58989_length_452_cov_3.252955_g39544_i0 PRJNA429937 58989 452 3.252955 14.7033566 Haploposthia rubropunctata 2183133 Xenacoelomorpha other_Eukaryota 84.2 1.55e-11   NTclustered gi|2065292245|gb|MZ520447.1| 2183133 g39544 i0 88.571 13.4380530973451 70 7 15 1 354 423 1492 1560 Haploposthia rubropunctata isolate UJ13-503 large subunit ribosomal RNA gene, partial sequence blastn 6074 84.2 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Haploposthiidae Haploposthia Haploposthia rubropunctata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;