RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA429937" and tax_phylum = "Negarnaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA429937 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2362820 2362820 PRJNA429937_P_NODE_146602_length_194_cov_1.539394_g123975_i0 PRJNA429937 146602 194 1.539394 2.98642436 root 1 Root_unresolved Root_unresolved 215 2.02e-51   NTclustered gi|2067732485|gb|MT994243.1| 11250 g123975 i0 100 103.438144329897 116 0 100 0 1 116 2880 2995 Mutant Human orthopneumovirus isolate recombinant hRSV-P-BFP, complete genome blastn 20067 215 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Pneumoviridae Orthopneumovirus Orthopneumovirus hominis
31624290 31624290 PRJNA429937_P_NODE_49756_length_502_cov_6.860465_g32509_i0 PRJNA429937 49756 502 6.860465 34.4395343 Fushun phasmavirus 1 2905464 Viruses Viruses 59.3 9.61e-7   NR YP_010840784.1 2905464 g32509 i0 46.8 0.370517928286853 62 30 37.1 1 221 36 282 340 YP_010840784.1 MAG: RNA-dependent RNA polymerase [Fushun phasmavirus 1] diamond 186 59.3 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Elliovirales Phasmaviridae Orthophasmavirus Orthophasmavirus sogatellae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;