RNAquarium Metadata Server
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contig_metadata

14 rows where bioproject = "PRJNA429937" and tax_phylum = "Kitrinoviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 14 ✖

tax_kingdom 1

bioproject 1

  • PRJNA429937 · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7465424 7465424 PRJNA429937_P_NODE_152946_length_171_cov_2.084507_g130319_i0 PRJNA429937 152946 171 2.084507 3.56450697 root 1 Root_unresolved Root_unresolved 252 1.32e-62   NTclustered gi|2575892337|gb|OR233204.1| 112229 g130319 i0 92.778 21.280701754386 180 3 100 7 1 171 6389 6211 Pepino mosaic virus isolate DSMZ PV-0975, complete genome blastn 3639 252 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
19553382 19553382 PRJNA429937_P_NODE_8336_length_1235_cov_3.791045_g4913_i0 PRJNA429937 8336 1235 3.791045 46.81940575 Bromovirus BMV 3427622 Viruses Viruses 2049 0   NTclustered gi|2329659867|gb|OK558647.1| 12302 g4913 i0 98.038 38.4453441295547 1172 16 98 2 7 1171 2339 1168 Brome mosaic virus isolate Portage- MB strain hypothetical protein gene, complete cds blastn 47480 2049 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Bromovirus Bromovirus BMV
22103849 22103849 PRJNA429937_P_NODE_72058_length_395_cov_2.207650_g50274_i0 PRJNA429937 72058 395 2.20765 8.7202175 Potexvirus trifolii 3433859 Viruses Viruses 298 4.4e-76   NTclustered gi|1078555000|dbj|LC190455.1| 12188 g50274 i0 93.909 11.2759493670886 197 12 87 0 47 243 274 470 White clover mosaic virus CP gene for coat protein, complete cds, isolate: Namwon blastn 4454 298 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
26663875 26663875 PRJNA429937_P_NODE_106381_length_284_cov_2.678431_g83761_i0 PRJNA429937 106381 284 2.678431 7.60674404 Bombyx mori latent virus 2065033 Viruses Viruses 77.8 5.42e-15   NR YP_009505643.1 2065033 g83761 i0 53.3 0.792253521126761 75 32 79.2 1 60 284 151 222 YP_009505643.1 coat protein [Bombyx mori latent virus] diamond 225 77.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae   Bombyx mori latent virus
26997150 26997150 PRJNA429937_P_NODE_149302_length_185_cov_2.051282_g126675_i0 PRJNA429937 149302 185 2.051282 3.7948717 Maculavirus 249185 Viruses Viruses 52.4 6.91e-6   NR YP_009551952.1 2094260 g126675 i0 56.3 1.52432432432432 48 19 74.6 1 26 163 713 760 YP_009551952.1 polyprotein [Bee Macula-Like virus 2] diamond 282 52.8 0.992424242424242 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae Maculavirus Bee Macula-Like virus 2
28023365 28023365 PRJNA429937_P_NODE_40965_length_562_cov_3.493433_g25973_i0 PRJNA429937 40965 562 3.493433 19.63309346 Wufeng shrew carmotetravirus 1 3077505 Viruses Viruses 56.6 1.31e-5   NR WOK58419.1 3077505 g25973 i0 29.2 0.47508896797153 89 63 47.5 0 388 122 539 627 WOK58419.1 MAG: RNA-dependent RNA polymerase [Wufeng shrew carmotetravirus 1] diamond 267 56.6 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Carmotetraviridae   Wufeng shrew carmotetravirus 1
28086322 28086322 PRJNA429937_P_NODE_67805_length_412_cov_2.070496_g46622_i0 PRJNA429937 67805 412 2.070496 8.53044352 Tymovirales sp. 1955157 Viruses Viruses 58.2 1.04e-6   NR XCO49695.1 1955157 g46622 i0 43.1 1.05582524271845 72 41 52.4 0 282 67 1142 1213 XCO49695.1 MAG: putative ORF1 protein [Tymovirales sp.] diamond 435 58.2 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Tymovirales sp.
28117887 28117887 PRJNA429937_P_NODE_24745_length_738_cov_2.416079_g14787_i0 PRJNA429937 24745 738 2.416079 17.83066302 Tymovirales sp. 1955157 Viruses Viruses 77.8 3.77e-13   NR XCO49696.1 1955157 g14787 i0 65.5 0.443089430894309 55 19 22.4 0 524 688 150 204 XCO49696.1 MAG: putative ORF2 protein [Tymovirales sp.] diamond 327 77.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Tymovirales sp.
28307494 28307494 PRJNA429937_P_NODE_70386_length_401_cov_7.981183_g48811_i0 PRJNA429937 70386 401 7.981183 32.00454383 Bombyx mori Macula-like virus 288456 Viruses Viruses 85.9 1.9e-18   NR YP_004464932.1 288456 g48811 i0 40.6 0.718204488778055 96 57 71.8 0 357 70 39 134 YP_004464932.1 unnamed protein product [Bombyx mori Macula-like virus] diamond 288 85.9 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae Maculavirus Bombyx mori Macula-like virus
28907123 28907123 PRJNA429937_P_NODE_79528_length_367_cov_8.698225_g57161_i0 PRJNA429937 79528 367 8.698225 31.92248575 Bombyx mori Macula-like virus 288456 Viruses Viruses 85.9 1.31e-18   NR YP_004464932.1 288456 g57161 i0 40.6 0.784741144414169 96 57 78.5 0 11 298 39 134 YP_004464932.1 unnamed protein product [Bombyx mori Macula-like virus] diamond 288 85.9 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae Maculavirus Bombyx mori Macula-like virus
29128629 29128629 PRJNA429937_P_NODE_68229_length_410_cov_2.858268_g46971_i0 PRJNA429937 68229 410 2.858268 11.7188988 Drosophila-associated tymovirus 2900522 Viruses Viruses 110 5.01e-25   NR UFT26908.1 2900522 g46971 i0 61.4 1.90975609756098 83 32 60.7 0 65 313 13 95 UFT26908.1 putative polyprotein [Drosophila-associated tymovirus] diamond 783 110 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Drosophila-associated tymovirus
29886330 29886330 PRJNA429937_P_NODE_24891_length_736_cov_2.512023_g14870_i0 PRJNA429937 24891 736 2.512023 18.48848928 Tymovirales sp. 1955157 Viruses Viruses 77.8 3.7e-13   NR XCO49696.1 1955157 g14870 i0 65.5 0.44429347826087 55 19 22.4 0 215 51 150 204 XCO49696.1 MAG: putative ORF2 protein [Tymovirales sp.] diamond 327 77.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Tymovirales sp.
31687550 31687550 PRJNA429937_P_NODE_80297_length_365_cov_2.672619_g57897_i0 PRJNA429937 80297 365 2.672619 9.75505935 Tymovirales sp. 1955157 Viruses Viruses 77.8 1.42e-14   NR XCO49696.1 1955157 g57897 i0 65.5 0.895890410958904 55 19 45.2 0 151 315 150 204 XCO49696.1 MAG: putative ORF2 protein [Tymovirales sp.] diamond 327 77.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Tymovirales sp.
32888172 32888172 PRJNA429937_P_NODE_60060_length_447_cov_2.669856_g40376_i0 PRJNA429937 60060 447 2.669856 11.93425632 Tymovirales sp. 1955157 Viruses Viruses 77.8 2.17e-13   NR XCO49695.1 1955157 g40376 i0 51.3 0.536912751677852 80 26 52.3 2 211 444 60 128 XCO49695.1 MAG: putative ORF1 protein [Tymovirales sp.] diamond 240 77.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Tymovirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;