RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA429937" and tax_phylum = "Gastrotricha"

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tax_superkingdom 1

tax_phylum 1

  • Gastrotricha · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA429937 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32130697 32130697 PRJNA429937_P_NODE_134018_length_216_cov_2.668449_g111391_i0 PRJNA429937 134018 216 2.668449 5.76384984 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 109 6.91e-26   NR YP_009136573.1 1194616 g111391 i0 91.5 0.819444444444444 59 5 81.9 0 179 3 332 390 YP_009136573.1 NADH dehydrogenase subunit 5 [Lepidodermella squamata] diamond 177 109 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
32636171 32636171 PRJNA429937_P_NODE_140120_length_205_cov_2.835227_g117493_i0 PRJNA429937 140120 205 2.835227 5.81221535 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 109 5.850000000000001e-26   NR YP_009136573.1 1194616 g117493 i0 91.5 0.863414634146341 59 5 86.3 0 27 203 332 390 YP_009136573.1 NADH dehydrogenase subunit 5 [Lepidodermella squamata] diamond 177 109 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;