RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA429937" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA429937 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17665021 17665021 PRJNA429937_P_NODE_26554_length_711_cov_2.456012_g15936_i0 PRJNA429937 26554 711 2.456012 17.46224532 Fidelibacterota bacterium 2026760 Bacteria Bacteria 246 8.8e-72   NR MCJ7792635.1 2026760 g15936 i0 85.5 2.91139240506329 138 20 58.2 0 644 231 1 138 MCJ7792635.1 ATP-dependent helicase [Fidelibacterota bacterium] diamond 2070 246 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
27123516 27123516 PRJNA429937_P_NODE_118482_length_252_cov_3.295964_g95856_i0 PRJNA429937 118482 252 3.295964 8.30582928 Bacteria 2 Bacteria Bacteria 118 8.81e-29   NR MFA5436890.1 2026760 g95856 i0 59 1.97619047619048 83 34 98.8 0 3 251 517 599 MFA5436890.1 hypothetical protein [Fidelibacterota bacterium] diamond 498 118 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28875730 28875730 PRJNA429937_P_NODE_128228_length_229_cov_1.925000_g105601_i0 PRJNA429937 128228 229 1.925 4.40825 Fidelibacterota bacterium 2026760 Bacteria Bacteria 46.6 7.61e-4   NR MBL50888.1 2026760 g105601 i0 48.9 0.589519650655022 45 23 59 0 228 94 112 156 MBL50888.1 hypothetical protein [Fidelibacterota bacterium] diamond 135 46.6 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;