RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA429937" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA429937 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2978165 2978165 PRJNA429937_P_NODE_82203_length_359_cov_2.018182_g59744_i0 PRJNA429937 82203 359 2.018182 7.24527338 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.034   NTclustered gi|2917940696|emb|OZ237557.1| 6108 g59744 i0 100 0.0779944289693593 28 0 8 0 305 332 17833514 17833487 Anemonia sulcata genome assembly, chromosome: 3 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
13181113 13181113 PRJNA429937_P_NODE_78751_length_370_cov_3.788856_g56424_i0 PRJNA429937 78751 370 3.788856 14.0187672 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.01   NTclustered gi|2917940687|emb|OZ237555.1| 6108 g56424 i0 100 0.0783783783783784 29 0 8 0 16 44 25943373 25943401 Anemonia sulcata genome assembly, chromosome: 1 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
26886094 26886094 PRJNA429937_P_NODE_71781_length_396_cov_2.618529_g50026_i0 PRJNA429937 71781 396 2.618529 10.36937484 Hydra vulgaris 6087 Cnidaria other_Eukaryota 51.6 1.57e-4   NR XP_047123845.1 6087 g50026 i0 29.1 0.598484848484849 79 56 59.8 0 385 149 560 638 XP_047123845.1 uncharacterized protein K02A2.6 [Hydra vulgaris] diamond 237 51.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
28591700 28591700 PRJNA429937_P_NODE_23887_length_751_cov_6.574792_g14258_i0 PRJNA429937 23887 751 6.574792 49.37668792 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 141 4.36e-34   NR KXJ08474.1 2652724 g14258 i0 37.6 3.69107856191744 186 112 74.3 2 580 23 182 363 KXJ08474.1 Uncharacterized protein K02A2.6, partial [Exaiptasia diaphana] diamond 2772 141 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;