RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA429937" and tax_phylum = "Candidatus Walliibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Walliibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA429937 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26695776 26695776 PRJNA429937_P_NODE_42341_length_552_cov_2.407266_g26937_i0 PRJNA429937 42341 552 2.407266 13.28810832 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 84.7 1.33e-15   NR MDD2717160.1 2053640 g26937 i0 46.2 1.52173913043478 93 50 50.5 0 529 251 39 131 MDD2717160.1 hypothetical protein [Candidatus Wallbacteria bacterium] diamond 840 84.7 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium
27802391 27802391 PRJNA429937_P_NODE_49864_length_502_cov_2.547569_g32597_i0 PRJNA429937 49864 502 2.547569 12.78879638 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 110 1.98e-25   NR MDD2717160.1 2053640 g32597 i0 51.9 0.645418326693227 108 52 64.5 0 479 156 39 146 MDD2717160.1 hypothetical protein [Candidatus Wallbacteria bacterium] diamond 324 110 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;