RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA429937" and tax_phylum = "Candidatus Odinarchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Odinarchaeota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA429937 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28402161 28402161 PRJNA429937_P_NODE_59146_length_451_cov_4.289100_g20478_i2 PRJNA429937 59146 451 4.2891 19.343841 Candidatus Odinarchaeota archaeon 2053490 Archaea Archaea 87.4 5.35e-18   NR MCD6164979.1 2053490 g20478 i2 65.6 1.15742793791574 64 22 42.6 0 406 215 145 208 MCD6164979.1 radical SAM protein [Candidatus Odinarchaeota archaeon] diamond 522 87.4 1 Archaea   Promethearchaeati Candidatus Odinarchaeota         Candidatus Odinarchaeota archaeon
29208212 29208212 PRJNA429937_P_NODE_69409_length_405_cov_4.694149_g20478_i4 PRJNA429937 69409 405 4.694149 19.01130345 root 1 Root_unresolved Root_unresolved 86.7 6.26e-18   NR MCD6164979.1 2053490 g20478 i4 70.7 1.22962962962963 58 17 43 0 9 182 151 208 MCD6164979.1 radical SAM protein [Candidatus Odinarchaeota archaeon] diamond 498 86.7 1 Archaea   Promethearchaeati Candidatus Odinarchaeota         Candidatus Odinarchaeota archaeon
30201865 30201865 PRJNA429937_P_NODE_62912_length_433_cov_4.522277_g20478_i3 PRJNA429937 62912 433 4.522277 19.58145941 Candidatus Odinarchaeota archaeon 2053490 Archaea Archaea 88.2 2.23e-18   NR MCD6164979.1 2053490 g20478 i3 67.7 0.859122401847575 62 20 43 0 400 215 147 208 MCD6164979.1 radical SAM protein [Candidatus Odinarchaeota archaeon] diamond 372 88.2 1 Archaea   Promethearchaeati Candidatus Odinarchaeota         Candidatus Odinarchaeota archaeon
30928876 30928876 PRJNA429937_P_NODE_56034_length_467_cov_4.292237_g20478_i1 PRJNA429937 56034 467 4.292237 20.04474679 Candidatus Odinarchaeota archaeon 2053490 Archaea Archaea 87.4 6.27e-18   NR MCD6164979.1 2053490 g20478 i1 70.7 1.0406852248394 58 17 37.3 0 80 253 151 208 MCD6164979.1 radical SAM protein [Candidatus Odinarchaeota archaeon] diamond 486 87.4 1 Archaea   Promethearchaeati Candidatus Odinarchaeota         Candidatus Odinarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;