RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA429937", tax_kingdom = "Shotokuvirae" and tax_phylum = "Cressdnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 1 ✖

tax_kingdom 1

  • Shotokuvirae · 1 ✖

bioproject 1

  • PRJNA429937 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17004645 17004645 PRJNA429937_P_NODE_75254_length_382_cov_5.028329_g53150_i0 PRJNA429937 75254 382 5.028329 19.20821678 Gemykrogvirus 1985367 Viruses Viruses 632 1.0199999999999998e-176   NTclustered gi|2045610848|gb|MW183017.1| 1985367 g53150 i0 98.333 6.59685863874346 360 6 94 0 23 382 1734 2093 MAG: Gemykrogvirus isolate thr147gen1, complete genome blastn 2520 632 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae Gemykrogvirus  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;