contig_metadata
58 rows where bioproject = "PRJNA429937", tax_kingdom = "Pseudomonadati" and tax_phylum = "Nitrospirota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1700791 | 1700791 | PRJNA429937_P_NODE_140142_length_205_cov_2.636364_g117515_i0 | PRJNA429937 | 140142 | 205 | 2.636364 | 5.4045462 | Nitrospira defluvii | 330214 | Bacteria | Bacteria | 187 | 4.6999999999999985e-43 | NTclustered | gi|300603458|emb|FP929003.1| | 330214 | g117515 | i0 | 96.46 | 1.02926829268293 | 113 | 4 | 100 | 0 | 1 | 113 | 1325806 | 1325918 | Candidatus Nitrospira defluvii chromosome, complete genome | blastn | 211 | 187 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira defluvii | ||
| 1701065 | 1701065 | PRJNA429937_P_NODE_21082_length_801_cov_14.480570_g12470_i0 | PRJNA429937 | 21082 | 801 | 14.48057 | 115.9893657 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 898 | 0 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g12470 | i0 | 87.859 | 8.27965043695381 | 766 | 92 | 96 | 1 | 20 | 785 | 3238364 | 3237600 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 6632 | 898 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 1701092 | 1701092 | PRJNA429937_P_NODE_22002_length_784_cov_24.170861_g13058_i0 | PRJNA429937 | 22002 | 784 | 24.170861 | 189.49955024 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 590 | 1.3499999999999998e-163 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g13058 | i0 | 84.124 | 0.779336734693878 | 611 | 95 | 78 | 2 | 23 | 631 | 1126273 | 1126883 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 611 | 590 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 1701096 | 1701096 | PRJNA429937_P_NODE_22182_length_781_cov_3.510638_g13176_i0 | PRJNA429937 | 22182 | 781 | 3.510638 | 27.41808278 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 614 | 7.969999999999998e-171 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g13176 | i0 | 85.354 | 1.01024327784891 | 594 | 85 | 80 | 2 | 171 | 763 | 2078282 | 2077690 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 789 | 614 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 1701849 | 1701849 | PRJNA429937_P_NODE_56722_length_463_cov_14.271889_g37802_i0 | PRJNA429937 | 56722 | 463 | 14.271889 | 66.07884607 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 632 | 1.2599999999999996e-176 | NTclustered | gi|2511640680|gb|CP126121.1| | 70125 | g37802 | i0 | 96.354 | 81.3131749460043 | 384 | 14 | 83 | 0 | 2 | 385 | 201355 | 201738 | MAG: Nitrospira sp. isolate bin_001 chromosome, complete genome | blastn | 37648 | 632 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 2976363 | 2976363 | PRJNA429937_P_NODE_115283_length_260_cov_4.722944_g92657_i0 | PRJNA429937 | 115283 | 260 | 4.722944 | 12.2796544 | Nitrospira tepida | 2973512 | Bacteria | Bacteria | 193 | 1.34e-44 | NTclustered | gi|2526808154|emb|OX365700.1| | 2973512 | g92657 | i0 | 81.513 | 0.915384615384615 | 238 | 41 | 91 | 3 | 24 | 259 | 333361 | 333125 | Nitrospira sp. DNF genome assembly, chromosome: NsDNF | blastn | 238 | 193 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira tepida | ||
| 2977221 | 2977221 | PRJNA429937_P_NODE_34923_length_613_cov_2.924658_g21652_i0 | PRJNA429937 | 34923 | 613 | 2.924658 | 17.92815354 | Nitrospira lenta | 1436998 | Bacteria | Bacteria | 352 | 2.63e-115 | NR | WP_121989553.1 | 1436998 | g21652 | i0 | 85.1 | 1.01794453507341 | 208 | 18 | 96.9 | 2 | 2 | 595 | 437 | 641 | WP_121989553.1 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase [Nitrospira lenta] | diamond | 624 | 352 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira lenta | ||
| 2977503 | 2977503 | PRJNA429937_P_NODE_47283_length_518_cov_1.889571_g30657_i0 | PRJNA429937 | 47283 | 518 | 1.889571 | 9.78797778 | Dissulfurispiraceae bacterium | 2952959 | Bacteria | Bacteria | 160 | 2.66e-47 | NR | HSW63685.1 | 2952959 | g30657 | i0 | 81.1 | 0.55019305019305 | 95 | 18 | 55 | 0 | 400 | 116 | 1 | 95 | HSW63685.1 3TM-type holin [Dissulfurispiraceae bacterium] | diamond | 285 | 160 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Thermodesulfovibrionia | Thermodesulfovibrionales | Dissulfurispiraceae | Dissulfurispiraceae bacterium | |||
| 4252632 | 4252632 | PRJNA429937_P_NODE_112984_length_266_cov_6.274262_g90361_i0 | PRJNA429937 | 112984 | 266 | 6.274262 | 16.68953692 | PVC group | 1783257 | Bacteria | Bacteria | 150 | 4.62e-40 | NR | MDH4088013.1 | 70125 | g90361 | i0 | 93.1 | 48.7105263157895 | 72 | 5 | 81.2 | 0 | 49 | 264 | 568 | 639 | MDH4088013.1 alpha-glucan family phosphorylase [Nitrospira sp.] | diamond | 12957 | 151 | 0.993377483443709 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 4252888 | 4252888 | PRJNA429937_P_NODE_138724_length_207_cov_92.056180_g116097_i0 | PRJNA429937 | 138724 | 207 | 92.05618 | 190.5562926 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 342 | 9.599999999999999e-90 | NTclustered | gi|2863125063|dbj|AP038805.1| | 70125 | g116097 | i0 | 98.953 | 162.951690821256 | 191 | 2 | 92 | 0 | 1 | 191 | 2094005 | 2094195 | MAG: Nitrospira sp. AFB01 DNA, complete genome | blastn | 33731 | 342 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 4253713 | 4253713 | PRJNA429937_P_NODE_43324_length_545_cov_2.298450_g27672_i0 | PRJNA429937 | 43324 | 545 | 2.29845 | 12.5265525 | Candidatus Nitrospira inopinata | 1715989 | Bacteria | Bacteria | 163 | 2.37e-35 | NTclustered | gi|952974062|emb|LN885086.1| | 1715989 | g27672 | i0 | 90.323 | 0.607339449541284 | 124 | 12 | 23 | 0 | 422 | 545 | 2124014 | 2124137 | Nitrospira sp. ENR4 genome assembly NiCh1, chromosome : 1 | blastn | 331 | 163 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira inopinata | ||
| 5530061 | 5530061 | PRJNA429937_P_NODE_2605_length_1939_cov_4.958639_g1563_i0 | PRJNA429937 | 2605 | 1939 | 4.958639 | 96.14801021 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 320 | 4.86e-102 | NR | TKB80191.1 | 70125 | g1563 | i0 | 92.8 | 0.256833419288293 | 166 | 12 | 25.7 | 0 | 1378 | 881 | 21 | 186 | TKB80191.1 MAG: Eco29kI family restriction endonuclease [Nitrospira sp.] | diamond | 498 | 320 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 6803260 | 6803260 | PRJNA429937_P_NODE_10426_length_1122_cov_3.763038_g5815_i1 | PRJNA429937 | 10426 | 1122 | 3.763038 | 42.22128636 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 311 | 1.71e-79 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g5815 | i1 | 84.79 | 0.275401069518717 | 309 | 47 | 28 | 0 | 291 | 599 | 2197830 | 2197522 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 309 | 311 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 6803293 | 6803293 | PRJNA429937_P_NODE_10666_length_1112_cov_3.605725_g1563_i2 | PRJNA429937 | 10666 | 1112 | 3.605725 | 40.095662 | Nitrospira lenta | 1436998 | Bacteria | Bacteria | 214 | 4.46e-65 | NR | WP_146216153.1 | 1436998 | g1563 | i2 | 99.1 | 0.294064748201439 | 109 | 1 | 29.4 | 0 | 933 | 607 | 71 | 179 | WP_146216153.1 hypothetical protein [Nitrospira lenta] | diamond | 327 | 214 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira lenta | ||
| 8079252 | 8079252 | PRJNA429937_P_NODE_14467_length_965_cov_4.149573_g1174_i2 | PRJNA429937 | 14467 | 965 | 4.149573 | 40.04337945 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 242 | 2.36e-74 | NR | WP_053377998.1 | 42253 | g1174 | i2 | 94.4 | 1.93989637305699 | 125 | 7 | 38.9 | 0 | 591 | 965 | 1 | 125 | WP_053377998.1 alpha-ketoacid dehydrogenase subunit beta [Nitrospira moscoviensis] | diamond | 1872 | 242 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 8079803 | 8079803 | PRJNA429937_P_NODE_32187_length_640_cov_5.178396_g17314_i1 | PRJNA429937 | 32187 | 640 | 5.178396 | 33.1417344 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 632 | 1.7899999999999997e-176 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g17314 | i1 | 87.143 | 8.7859375 | 560 | 68 | 87 | 4 | 62 | 618 | 3197046 | 3197604 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 5623 | 632 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 9353649 | 9353649 | PRJNA429937_P_NODE_104388_length_289_cov_5.857692_g81770_i0 | PRJNA429937 | 104388 | 289 | 5.857692 | 16.92872988 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 422 | 1.77e-113 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g81770 | i0 | 93.056 | 279.543252595156 | 288 | 20 | 99 | 0 | 2 | 289 | 1277504 | 1277791 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 80788 | 422 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 9354269 | 9354269 | PRJNA429937_P_NODE_18108_length_864_cov_4.770060_g10720_i0 | PRJNA429937 | 18108 | 864 | 4.77006 | 41.2133184 | Nitrospira lenta | 1436998 | Bacteria | Bacteria | 493 | 1.7299999999999995e-171 | NR | WP_121988443.1 | 1436998 | g10720 | i0 | 97 | 0.9375 | 270 | 8 | 93.8 | 0 | 840 | 31 | 223 | 492 | WP_121988443.1 sensor histidine kinase [Nitrospira lenta] | diamond | 810 | 493 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira lenta | ||
| 9354798 | 9354798 | PRJNA429937_P_NODE_39088_length_577_cov_3.529197_g24624_i0 | PRJNA429937 | 39088 | 577 | 3.529197 | 20.36346669 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 569 | 1.2699999999999997e-157 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g24624 | i0 | 89.686 | 0.974003466204506 | 446 | 46 | 77 | 0 | 19 | 464 | 2001735 | 2002180 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 562 | 569 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 9355127 | 9355127 | PRJNA429937_P_NODE_54208_length_477_cov_3.395089_g35859_i0 | PRJNA429937 | 54208 | 477 | 3.395089 | 16.19457453 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 118 | 5.69e-28 | NR | MBM4134044.1 | 70125 | g35859 | i0 | 39.3 | 1.0251572327044 | 163 | 87 | 95 | 2 | 459 | 7 | 123 | 285 | MBM4134044.1 imidazole glycerol phosphate synthase subunit HisF [Nitrospira sp.] | diamond | 489 | 118 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 10631504 | 10631504 | PRJNA429937_P_NODE_92709_length_324_cov_5.013559_g70123_i0 | PRJNA429937 | 92709 | 324 | 5.013559 | 16.24393116 | Candidatus Nitrospira inopinata | 1715989 | Bacteria | Bacteria | 255 | 2.16e-63 | NTclustered | gi|952974062|emb|LN885086.1| | 1715989 | g70123 | i0 | 93.567 | 207.833333333333 | 171 | 11 | 53 | 0 | 1 | 171 | 1781595 | 1781425 | Nitrospira sp. ENR4 genome assembly NiCh1, chromosome : 1 | blastn | 67338 | 255 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira inopinata | ||
| 11904788 | 11904788 | PRJNA429937_P_NODE_15150_length_944_cov_4.457923_g1174_i3 | PRJNA429937 | 15150 | 944 | 4.457923 | 42.08279312 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 242 | 1.86e-74 | NR | WP_053377998.1 | 42253 | g1174 | i3 | 94.4 | 1.98305084745763 | 125 | 7 | 39.7 | 0 | 375 | 1 | 1 | 125 | WP_053377998.1 alpha-ketoacid dehydrogenase subunit beta [Nitrospira moscoviensis] | diamond | 1872 | 242 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 11904835 | 11904835 | PRJNA429937_P_NODE_15710_length_926_cov_22.208473_g9285_i0 | PRJNA429937 | 15710 | 926 | 22.208473 | 205.65045998 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 933 | 0 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g9285 | i0 | 85.73 | 3.39740820734341 | 883 | 126 | 95 | 0 | 20 | 902 | 304795 | 303913 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 3146 | 933 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 13180025 | 13180025 | PRJNA429937_P_NODE_2611_length_1938_cov_4.998952_g1563_i1 | PRJNA429937 | 2611 | 1938 | 4.998952 | 96.87968976 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 406 | 1.48e-135 | NR | TKB80191.1 | 70125 | g1563 | i1 | 93.3 | 0.323529411764706 | 209 | 14 | 32.4 | 0 | 562 | 1188 | 21 | 229 | TKB80191.1 MAG: Eco29kI family restriction endonuclease [Nitrospira sp.] | diamond | 627 | 406 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 13180837 | 13180837 | PRJNA429937_P_NODE_63911_length_429_cov_2.042500_g43445_i0 | PRJNA429937 | 63911 | 429 | 2.0425 | 8.762325 | Dissulfurispiraceae bacterium | 2952959 | Bacteria | Bacteria | 157 | 1e-46 | NR | HSW63685.1 | 2952959 | g43445 | i0 | 84.4 | 0.629370629370629 | 90 | 14 | 62.9 | 0 | 159 | 428 | 1 | 90 | HSW63685.1 3TM-type holin [Dissulfurispiraceae bacterium] | diamond | 270 | 157 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Thermodesulfovibrionia | Thermodesulfovibrionales | Dissulfurispiraceae | Dissulfurispiraceae bacterium | |||
| 14455084 | 14455084 | PRJNA429937_P_NODE_20132_length_820_cov_3.792668_g11903_i0 | PRJNA429937 | 20132 | 820 | 3.792668 | 31.0998776 | Nitrospira lenta | 1436998 | Bacteria | Bacteria | 122 | 7.99e-32 | NR | WP_146216181.1 | 1436998 | g11903 | i0 | 94.9 | 0.215853658536585 | 59 | 3 | 21.6 | 0 | 393 | 569 | 1 | 59 | WP_146216181.1 hypothetical protein [Nitrospira lenta] | diamond | 177 | 122 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira lenta | ||
| 15729701 | 15729701 | PRJNA429937_P_NODE_58353_length_455_cov_4.352113_g39053_i0 | PRJNA429937 | 58353 | 455 | 4.352113 | 19.80211415 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 525 | 2.1599999999999992e-144 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g39053 | i0 | 89.26 | 0.920879120879121 | 419 | 45 | 92 | 0 | 23 | 441 | 3091134 | 3090716 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 419 | 525 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 17005004 | 17005004 | PRJNA429937_P_NODE_9894_length_1150_cov_3.756467_g5815_i0 | PRJNA429937 | 9894 | 1150 | 3.756467 | 43.1993705 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 340 | 2.23e-88 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g5815 | i0 | 84.866 | 0.29304347826087 | 337 | 51 | 29 | 0 | 524 | 860 | 2197522 | 2197858 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 337 | 340 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 18277740 | 18277740 | PRJNA429937_P_NODE_17075_length_890_cov_4.242741_g1563_i3 | PRJNA429937 | 17075 | 890 | 4.242741 | 37.7603949 | Nitrospira lenta | 1436998 | Bacteria | Bacteria | 187 | 2.2399999999999996e-55 | NR | WP_146216153.1 | 1436998 | g1563 | i3 | 98.9 | 0.31685393258427 | 94 | 1 | 31.7 | 0 | 3 | 284 | 86 | 179 | WP_146216153.1 hypothetical protein [Nitrospira lenta] | diamond | 282 | 187 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira lenta | ||
| 18278433 | 18278433 | PRJNA429937_P_NODE_4695_length_1569_cov_4.323377_g2777_i0 | PRJNA429937 | 4695 | 1569 | 4.323377 | 67.83378513 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 1053 | 0 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g2777 | i0 | 83.659 | 1.23199490121096 | 1126 | 177 | 82 | 7 | 168 | 1289 | 1815351 | 1814229 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 1933 | 1053 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 19552078 | 19552078 | PRJNA429937_P_NODE_1956_length_2146_cov_4.380727_g1174_i0 | PRJNA429937 | 1956 | 2146 | 4.380727 | 94.01040142 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 634 | 1.7299999999999994e-176 | NTclustered | gi|2290911150|gb|CP060501.1| | 70125 | g1174 | i0 | 79.109 | 1.96738117427773 | 943 | 180 | 44 | 10 | 2 | 936 | 1437590 | 1436657 | MAG: Nitrospira sp. isolate NSFW chromosome, complete genome | blastn | 4222 | 634 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 19552890 | 19552890 | PRJNA429937_P_NODE_54956_length_473_cov_3.684685_g36419_i0 | PRJNA429937 | 54956 | 473 | 3.684685 | 17.42856005 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 473 | 8.289999999999999e-129 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g36419 | i0 | 86.27 | 0.923890063424947 | 437 | 58 | 92 | 2 | 23 | 457 | 3259528 | 3259964 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 437 | 473 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 20827953 | 20827953 | PRJNA429937_P_NODE_23197_length_763_cov_2.942779_g13823_i0 | PRJNA429937 | 23197 | 763 | 2.942779 | 22.45340377 | Nitrospira lenta | 1436998 | Bacteria | Bacteria | 250 | 2.45e-78 | NR | WP_121989730.1 | 1436998 | g13823 | i0 | 98.4 | 0.503276539973788 | 128 | 1 | 49.9 | 1 | 381 | 1 | 1 | 128 | WP_121989730.1 polyamine ABC transporter substrate-binding protein [Nitrospira lenta] | diamond | 384 | 250 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira lenta | ||
| 22102667 | 22102667 | PRJNA429937_P_NODE_16618_length_901_cov_4.932339_g9839_i0 | PRJNA429937 | 16618 | 901 | 4.932339 | 44.44037439 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 737 | 0 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g9839 | i0 | 81.88 | 0.980022197558269 | 883 | 152 | 98 | 7 | 23 | 901 | 960945 | 960067 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 883 | 737 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 22102980 | 22102980 | PRJNA429937_P_NODE_28658_length_681_cov_5.119632_g17314_i0 | PRJNA429937 | 28658 | 681 | 5.119632 | 34.86469392 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 632 | 1.9099999999999995e-176 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g17314 | i0 | 87.143 | 8.25697503671072 | 560 | 68 | 82 | 4 | 103 | 659 | 3197046 | 3197604 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 5623 | 632 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 22103111 | 22103111 | PRJNA429937_P_NODE_34618_length_616_cov_3.432709_g21432_i0 | PRJNA429937 | 34618 | 616 | 3.432709 | 21.14548744 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 299 | 1.4499999999999996e-96 | NR | MEQ1795159.1 | 70125 | g21432 | i0 | 96.8 | 2.29383116883117 | 157 | 5 | 76.5 | 0 | 144 | 614 | 192 | 348 | MEQ1795159.1 oligosaccharide flippase family protein [Nitrospira sp.] | diamond | 1413 | 299 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 28166151 | 28166151 | PRJNA429937_P_NODE_150545_length_180_cov_2.145695_g127918_i0 | PRJNA429937 | 150545 | 180 | 2.145695 | 3.862251 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 63.2 | 8.15e-10 | NR | TLY34026.1 | 2026887 | g127918 | i0 | 45.8 | 3.55 | 59 | 32 | 98.3 | 0 | 179 | 3 | 257 | 315 | TLY34026.1 MAG: toll/interleukin-1 receptor domain-containing protein [Nitrospirota bacterium] | diamond | 639 | 63.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 28339097 | 28339097 | PRJNA429937_P_NODE_99066_length_305_cov_2.898551_g76457_i0 | PRJNA429937 | 99066 | 305 | 2.898551 | 8.84058055 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 211 | 1.02e-67 | NR | MEK6632600.1 | 2026887 | g76457 | i0 | 96 | 1.9672131147541 | 100 | 4 | 98.4 | 0 | 1 | 300 | 76 | 175 | MEK6632600.1 hypothetical protein [Nitrospirota bacterium] | diamond | 600 | 211 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 28513414 | 28513414 | PRJNA429937_P_NODE_82767_length_357_cov_2.716463_g60287_i0 | PRJNA429937 | 82767 | 357 | 2.716463 | 9.69777291 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 68.2 | 1.77e-10 | NR | MBF0557825.1 | 2026887 | g60287 | i0 | 28.9 | 4.34453781512605 | 190 | 52 | 90.8 | 3 | 34 | 357 | 822 | 1010 | MBF0557825.1 cation-transporting P-type ATPase [Nitrospirota bacterium] | diamond | 1551 | 68.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 28717990 | 28717990 | PRJNA429937_P_NODE_46167_length_525_cov_4.086694_g11903_i1 | PRJNA429937 | 46167 | 525 | 4.086694 | 21.4551435 | Nitrospira lenta | 1436998 | Bacteria | Bacteria | 80.5 | 1.68e-16 | NR | WP_146216181.1 | 1436998 | g11903 | i1 | 94.6 | 0.211428571428571 | 37 | 2 | 21.1 | 0 | 413 | 523 | 1 | 37 | WP_146216181.1 hypothetical protein [Nitrospira lenta] | diamond | 111 | 80.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira lenta | ||
| 29002542 | 29002542 | PRJNA429937_P_NODE_78488_length_371_cov_3.409357_g56176_i0 | PRJNA429937 | 78488 | 371 | 3.409357 | 12.64871447 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 57 | 1.32e-7 | NR | MEK7279519.1 | 2026887 | g56176 | i0 | 71 | 0.752021563342318 | 31 | 9 | 25.1 | 0 | 94 | 2 | 55 | 85 | MEK7279519.1 rhodanese-like domain-containing protein [Nitrospirota bacterium] | diamond | 279 | 57 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 29081838 | 29081838 | PRJNA429937_P_NODE_7308_length_1307_cov_4.026604_g4321_i0 | PRJNA429937 | 7308 | 1307 | 4.026604 | 52.62771428 | Nitrospira | 1234 | Bacteria | Bacteria | 59.7 | 9.59e-7 | NR | HRC43098.1 | 70125 | g4321 | i0 | 41.1 | 0.961744452945677 | 73 | 43 | 16.8 | 0 | 345 | 127 | 65 | 137 | HRC43098.1 tetratricopeptide repeat protein [Nitrospira sp.] | diamond | 1257 | 59.7 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29128638 | 29128638 | PRJNA429937_P_NODE_78589_length_371_cov_2.239766_g56274_i0 | PRJNA429937 | 78589 | 371 | 2.239766 | 8.30953186 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 233 | 1.07e-74 | NR | MBX9661659.1 | 2026770 | g56274 | i0 | 91.9 | 1.98921832884097 | 123 | 10 | 99.5 | 0 | 3 | 371 | 67 | 189 | MBX9661659.1 M23 family metallopeptidase [Nitrospiraceae bacterium] | diamond | 738 | 233 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 29791232 | 29791232 | PRJNA429937_P_NODE_59731_length_448_cov_5.346062_g40128_i0 | PRJNA429937 | 59731 | 448 | 5.346062 | 23.95035776 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 203 | 9.1e-65 | NR | MBU6434285.1 | 2026887 | g40128 | i0 | 86.8 | 4.01785714285714 | 121 | 16 | 81 | 0 | 3 | 365 | 7 | 127 | MBU6434285.1 type IV pili twitching motility protein PilT [Nitrospirota bacterium] | diamond | 1800 | 203 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 29822781 | 29822781 | PRJNA429937_P_NODE_93411_length_322_cov_3.000000_g70822_i0 | PRJNA429937 | 93411 | 322 | 3 | 9.66 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 207 | 8.97e-65 | NR | HNK16059.1 | 70125 | g70822 | i0 | 98.1 | 0.996894409937888 | 107 | 2 | 99.7 | 0 | 2 | 322 | 139 | 245 | HNK16059.1 hypothetical protein [Nitrospira sp.] | diamond | 321 | 207 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29886306 | 29886306 | PRJNA429937_P_NODE_109811_length_275_cov_1.723577_g87190_i0 | PRJNA429937 | 109811 | 275 | 1.723577 | 4.73983675 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 45.8 | 7.32e-4 | NR | MBI5410818.1 | 2026887 | g87190 | i0 | 100 | 1.00363636363636 | 23 | 0 | 25.1 | 0 | 71 | 3 | 36 | 58 | MBI5410818.1 YciI family protein [Nitrospirota bacterium] | diamond | 276 | 45.8 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 30423616 | 30423616 | PRJNA429937_P_NODE_30513_length_659_cov_2.936508_g18567_i0 | PRJNA429937 | 30513 | 659 | 2.936508 | 19.35158772 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 345 | 3.49e-115 | NR | MBX3319752.1 | 70125 | g18567 | i0 | 89.4 | 0.983308042488619 | 216 | 2 | 88.8 | 2 | 73 | 657 | 180 | 395 | MBX3319752.1 TolC family protein [Nitrospira sp.] | diamond | 648 | 345 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 30455216 | 30455216 | PRJNA429937_P_NODE_25093_length_732_cov_5.113798_g14989_i0 | PRJNA429937 | 25093 | 732 | 5.113798 | 37.43300136 | Nitrospira lenta | 1436998 | Bacteria | Bacteria | 494 | 1.2999999999999994e-175 | NR | WP_245924567.1 | 1436998 | g14989 | i0 | 94.3 | 2.95491803278689 | 244 | 14 | 100 | 0 | 1 | 732 | 14 | 257 | WP_245924567.1 acyl-CoA desaturase [Nitrospira lenta] | diamond | 2163 | 494 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira lenta | ||
| 30549583 | 30549583 | PRJNA429937_P_NODE_8273_length_1238_cov_4.462366_g1174_i1 | PRJNA429937 | 8273 | 1238 | 4.462366 | 55.24409108 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 343 | 1.5799999999999996e-112 | NR | HSN04156.1 | 70125 | g1174 | i1 | 91.9 | 1.98222940226171 | 185 | 15 | 44.8 | 0 | 3 | 557 | 148 | 332 | HSN04156.1 alpha-ketoacid dehydrogenase subunit beta [Nitrospira sp.] | diamond | 2454 | 343 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 30675892 | 30675892 | PRJNA429937_P_NODE_87053_length_343_cov_2.974522_g64496_i0 | PRJNA429937 | 87053 | 343 | 2.974522 | 10.20261046 | Candidatus Magnetobacterium casense | 1455061 | Bacteria | Bacteria | 80.9 | 3.16e-15 | NR | WP_218254340.1 | 1455061 | g64496 | i0 | 64.8 | 0.472303206997085 | 54 | 19 | 47.2 | 0 | 204 | 43 | 96 | 149 | WP_218254340.1 hypothetical protein, partial [Candidatus Magnetobacterium casense] | diamond | 162 | 80.9 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Thermodesulfovibrionia | Thermodesulfovibrionales | Candidatus Magnetobacteriaceae | Candidatus Magnetobacterium | Candidatus Magnetobacterium casense | ||
| 30770995 | 30770995 | PRJNA429937_P_NODE_63874_length_429_cov_2.640000_g43408_i0 | PRJNA429937 | 63874 | 429 | 2.64 | 11.3256 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 203 | 1.25e-63 | NR | MEK6632600.1 | 2026887 | g43408 | i0 | 93.1 | 1.41258741258741 | 101 | 7 | 70.6 | 0 | 429 | 127 | 76 | 176 | MEK6632600.1 hypothetical protein [Nitrospirota bacterium] | diamond | 606 | 203 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 30960455 | 30960455 | PRJNA429937_P_NODE_48394_length_511_cov_2.151452_g31488_i0 | PRJNA429937 | 48394 | 511 | 2.151452 | 10.99391972 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 191 | 1.08e-57 | NR | MBX9661659.1 | 2026770 | g31488 | i0 | 92.2 | 1.19765166340509 | 102 | 8 | 59.9 | 0 | 509 | 204 | 67 | 168 | MBX9661659.1 M23 family metallopeptidase [Nitrospiraceae bacterium] | diamond | 612 | 191 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 31071838 | 31071838 | PRJNA429937_P_NODE_32135_length_641_cov_2.686275_g19679_i0 | PRJNA429937 | 32135 | 641 | 2.686275 | 17.21902275 | Nitrospira | 1234 | Bacteria | Bacteria | 341 | 4.45e-114 | NR | OQW67014.1 | 1978765 | g19679 | i0 | 91.9 | 1.60998439937598 | 173 | 14 | 81 | 0 | 634 | 116 | 191 | 363 | OQW67014.1 MAG: hypothetical protein BVN29_05120 [Nitrospira sp. ST-bin5] | diamond | 1032 | 343 | 0.994169096209913 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. ST-bin5 | ||
| 31134574 | 31134574 | PRJNA429937_P_NODE_99815_length_303_cov_2.014599_g77206_i0 | PRJNA429937 | 99815 | 303 | 2.014599 | 6.10423497 | root | 1 | Root_unresolved | Root_unresolved | 86.3 | 1.44e-17 | NR | HKU52657.1 | 70125 | g77206 | i0 | 78 | 3.4950495049505 | 50 | 11 | 49.5 | 0 | 2 | 151 | 271 | 320 | HKU52657.1 hypothetical protein [Nitrospira sp.] | diamond | 1059 | 86.7 | 0.995386389850058 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 31307937 | 31307937 | PRJNA429937_P_NODE_24695_length_738_cov_7.080395_g14757_i0 | PRJNA429937 | 24695 | 738 | 7.080395 | 52.2533151 | Thermodesulfovibrionales bacterium | 2814272 | Bacteria | Bacteria | 183 | 1.0199999999999997e-54 | NR | MFA4828265.1 | 2814272 | g14757 | i0 | 72.2 | 1.7479674796748 | 108 | 30 | 43.9 | 0 | 8 | 331 | 58 | 165 | MFA4828265.1 dTDP-4-dehydrorhamnose 3,5-epimerase [Thermodesulfovibrionales bacterium] | diamond | 1290 | 183 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Thermodesulfovibrionia | Thermodesulfovibrionales | Thermodesulfovibrionales bacterium | ||||
| 31577696 | 31577696 | PRJNA429937_P_NODE_52396_length_487_cov_3.266376_g34501_i0 | PRJNA429937 | 52396 | 487 | 3.266376 | 15.90725112 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 77.4 | 3.6e-13 | NR | KJU83032.1 | 29290 | g34501 | i0 | 61.8 | 1.73716632443532 | 68 | 22 | 41.9 | 1 | 371 | 168 | 374 | 437 | KJU83032.1 secreted protein containing DUF1566, partial [Candidatus Magnetobacterium bavaricum] | diamond | 846 | 77.4 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Thermodesulfovibrionia | Thermodesulfovibrionales | Candidatus Magnetobacteriaceae | Candidatus Magnetobacterium | Candidatus Magnetobacterium bavaricum | ||
| 32130715 | 32130715 | PRJNA429937_P_NODE_46738_length_521_cov_4.065041_g11903_i2 | PRJNA429937 | 46738 | 521 | 4.065041 | 21.17886361 | Nitrospira lenta | 1436998 | Bacteria | Bacteria | 80.5 | 1.63e-16 | NR | WP_146216181.1 | 1436998 | g11903 | i2 | 94.6 | 0.213051823416507 | 37 | 2 | 21.3 | 0 | 409 | 519 | 1 | 37 | WP_146216181.1 hypothetical protein [Nitrospira lenta] | diamond | 111 | 80.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira lenta | ||
| 32604991 | 32604991 | PRJNA429937_P_NODE_8540_length_1223_cov_4.214405_g4321_i1 | PRJNA429937 | 8540 | 1223 | 4.214405 | 51.542173150000004 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 59.7 | 8.8e-7 | NR | HRC43098.1 | 70125 | g4321 | i1 | 41.1 | 0.179067865903516 | 73 | 43 | 17.9 | 0 | 960 | 1178 | 65 | 137 | HRC43098.1 tetratricopeptide repeat protein [Nitrospira sp.] | diamond | 219 | 59.7 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;