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contig_metadata

22 rows where bioproject = "PRJNA429937" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 22 ✖

bioproject 1

  • PRJNA429937 · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8080573 8080573 PRJNA429937_P_NODE_6907_length_1337_cov_14.831040_g4067_i0 PRJNA429937 6907 1337 14.83104 198.2910048 Thermococcus 2263 Archaea Archaea 767 2.2600000000000002e-259   NR WP_167728776.1 163002 g4067 i0 98.4 4.3866866118175 387 6 86.8 0 130 1290 20 406 WP_167728776.1 DNA polymerase domain-containing protein [Thermococcus sp. 9N3] diamond 5865 770 0.996103896103896 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. 9N3
10629543 10629543 PRJNA429937_P_NODE_113529_length_265_cov_3.012712_g90906_i0 PRJNA429937 113529 265 3.012712 7.9836868 Haloarcula regularis 3033392 Archaea Archaea 198 2.94e-46   NTclustered gi|2463595546|gb|CP119795.1| 3033392 g90906 i0 88.485 0.9660377358490572 165 17 96 2 102 265 99853 99690 Haloarcula regularis strain SYNS111 plasmid unnamed1, complete sequence blastn 256 198 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula regularis
11905897 11905897 PRJNA429937_P_NODE_62550_length_435_cov_3.105911_g42350_i0 PRJNA429937 62550 435 3.105911 13.510712850000001 Haloarcula regularis 3033392 Archaea Archaea 298 4.89e-76   NTclustered gi|2463595546|gb|CP119795.1| 3033392 g42350 i0 85.763 1.59080459770115 295 26 65 9 154 435 99562 99853 Haloarcula regularis strain SYNS111 plasmid unnamed1, complete sequence blastn 692 298 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula regularis
11906008 11906008 PRJNA429937_P_NODE_69010_length_407_cov_2.304233_g47626_i0 PRJNA429937 69010 407 2.304233 9.37822831 Haloarcula regularis 3033392 Archaea Archaea 198 4.74e-46   NTclustered gi|2463595546|gb|CP119795.1| 3033392 g47626 i0 88.485 0.734643734643735 165 17 73 2 1 164 99690 99853 Haloarcula regularis strain SYNS111 plasmid unnamed1, complete sequence blastn 299 198 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula regularis
15730307 15730307 PRJNA429937_P_NODE_93833_length_321_cov_2.071918_g71243_i0 PRJNA429937 93833 321 2.071918 6.65085678 Methanobacterium sp. MB1 1379702 Archaea Archaea 448 3.289999999999999e-121   NTclustered gi|557945513|emb|HG425166.1| 1379702 g71243 i0 99.197 7.08722741433022 249 0 98 2 9 255 743204 742956 Methanobacterium sp. MB1 complete sequence blastn 2275 448 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp. MB1
20829041 20829041 PRJNA429937_P_NODE_75537_length_381_cov_5.377841_g53418_i0 PRJNA429937 75537 381 5.377841 20.48957421 Halorubrum sp. CSM-61 2485838 Archaea Archaea 245 4.61e-78   NR WP_123619210.1 2485838 g53418 i0 95.1 0.960629921259842 122 6 96.1 0 14 379 34 155 WP_123619210.1 galactonate dehydratase [Halorubrum sp. CSM-61] diamond 366 245 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum sp. CSM-61
24653019 24653019 PRJNA429937_P_NODE_42300_length_552_cov_3.936902_g26907_i0 PRJNA429937 42300 552 3.936902 21.73169904 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 477 7.56e-130   NTclustered gi|2388573995|gb|CP113312.1| 2032688 g26907 i0 88.776 0.710144927536232 392 40 71 4 163 552 14392 14781 MAG: Candidatus Methanoperedens sp. isolate v3 plasmid unnamed blastn 392 477 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
27201955 27201955 PRJNA429937_P_NODE_5622_length_1464_cov_13.577700_g3308_i0 PRJNA429937 5622 1464 13.5777 198.777528 candidate division MSBL1 archaeon SCGC-AAA385M11 1698288 Archaea Archaea 162 1.16e-44   NR KXB09026.1 1698288 g3308 i0 94 0.172131147540984 84 5 17.2 0 878 1129 1 84 KXB09026.1 hypothetical protein AKJ60_01160 [candidate division MSBL1 archaeon SCGC-AAA385M11] diamond 252 162 1 Archaea candidate division MSBL1 Methanobacteriati Methanobacteriota         candidate division MSBL1 archaeon SCGC-AAA385M11
27486547 27486547 PRJNA429937_P_NODE_7463_length_1294_cov_8.309091_g4411_i0 PRJNA429937 7463 1294 8.309091 107.51963754 Methanobacteriota archaeon 2026739 Archaea Archaea 333 3.3999999999999993e-108   NR RZD45823.1 2026739 g4411 i0 47.9 0.783616692426584 338 169 77.7 3 233 1237 8 341 RZD45823.1 MAG: branched chain amino acid aminotransferase [Methanobacteriota archaeon] diamond 1014 333 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27991858 27991858 PRJNA429937_P_NODE_88245_length_339_cov_2.916129_g65678_i0 PRJNA429937 88245 339 2.916129 9.88567731 Methanobacteriota archaeon 2026739 Archaea Archaea 198 1.08e-62   NR MFH0904072.1 2026739 g65678 i0 93.5 0.955752212389381 108 7 95.6 0 1 324 70 177 MFH0904072.1 hypothetical protein [Methanobacteriota archaeon] diamond 324 198 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29475332 29475332 PRJNA429937_P_NODE_104930_length_288_cov_2.486486_g82312_i0 PRJNA429937 104930 288 2.486486 7.16107968 candidate division MSBL1 archaeon SCGC-AAA385M11 1698288 Archaea Archaea 115 3.62e-29   NR KXB09022.1 1698288 g82312 i0 85.7 0.65625 63 9 65.6 0 2 190 162 224 KXB09022.1 hypothetical protein AKJ60_01185 [candidate division MSBL1 archaeon SCGC-AAA385M11] diamond 189 115 1 Archaea candidate division MSBL1 Methanobacteriati Methanobacteriota         candidate division MSBL1 archaeon SCGC-AAA385M11
29776249 29776249 PRJNA429937_P_NODE_57171_length_461_cov_4.319444_g2639_i3 PRJNA429937 57171 461 4.319444 19.91263684 root 1 Root_unresolved Root_unresolved 114 2.61e-26   NR WP_336247442.1 2223 g2639 i3 52.5 1.8351409978308 141 57 85.9 3 396 1 245 384 WP_336247442.1 pilus assembly protein N-terminal domain-containing protein [Methanothrix soehngenii] diamond 846 114 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
29871123 29871123 PRJNA429937_P_NODE_10431_length_1122_cov_2.154620_g6122_i0 PRJNA429937 10431 1122 2.15462 24.1748364 root 1 Root_unresolved Root_unresolved 216 6.999999999999999e-62   NR MCX6692367.1 2052170 g6122 i0 40.7 3.42513368983957 317 158 78.3 7 1 879 88 398 MCX6692367.1 IS1380 family transposase [Methanoregula sp.] diamond 3843 218 0.990825688073395 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
30092072 30092072 PRJNA429937_P_NODE_51812_length_490_cov_4.377440_g2639_i2 PRJNA429937 51812 490 4.37744 21.449456 root 1 Root_unresolved Root_unresolved 116 1.06e-26   NR WP_336247442.1 2223 g2639 i2 52.5 1.7265306122449 141 57 80.8 3 396 1 245 384 WP_336247442.1 pilus assembly protein N-terminal domain-containing protein [Methanothrix soehngenii] diamond 846 116 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
30345536 30345536 PRJNA429937_P_NODE_4472_length_1596_cov_4.192087_g2639_i0 PRJNA429937 4472 1596 4.192087 66.90570852 root 1 Root_unresolved Root_unresolved 330 9.56e-102   NR WP_336247442.1 2223 g2639 i0 66.9 1.05639097744361 281 83 51.1 3 1596 781 245 524 WP_336247442.1 pilus assembly protein N-terminal domain-containing protein [Methanothrix soehngenii] diamond 1686 330 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
30439966 30439966 PRJNA429937_P_NODE_102593_length_295_cov_1.593985_g79979_i0 PRJNA429937 102593 295 1.593985 4.70225575 root 1 Root_unresolved Root_unresolved 46.2 0.00387   NR MEN6290573.1 2164 g79979 i0 91.7 1.95254237288136 24 2 24.4 0 3 74 208 231 MEN6290573.1 nucleotide sugar dehydrogenase [Methanobacterium sp.] diamond 576 46.6 0.991416309012876 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
30755821 30755821 PRJNA429937_P_NODE_72754_length_392_cov_2.851240_g50898_i0 PRJNA429937 72754 392 2.85124 11.1768608 root 1 Root_unresolved Root_unresolved 143 7.079999999999999e-37   NR HVN73417.1 2052170 g50898 i0 61.6 25.3316326530612 112 43 85.7 0 18 353 590 701 HVN73417.1 xanthine dehydrogenase family protein molybdopterin-binding subunit [Methanoregula sp.] diamond 9930 144 0.993055555555556 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
31086798 31086798 PRJNA429937_P_NODE_30475_length_659_cov_6.620635_g18542_i0 PRJNA429937 30475 659 6.620635 43.62998465 Methanobacteriota archaeon 2026739 Archaea Archaea 101 9.5e-21   NR MBF70874.1 2026739 g18542 i0 41.5 0.746585735963581 164 71 74.7 2 145 636 367 505 MBF70874.1 hypothetical protein [Methanobacteriota archaeon] diamond 492 101 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31118094 31118094 PRJNA429937_P_NODE_39275_length_576_cov_2.376600_g24755_i0 PRJNA429937 39275 576 2.3766 13.689216 Thermococcus sp. 35749 Archaea Archaea 152 8.27e-39   NR WP_297519241.1 35749 g24755 i0 55.3 3.3125 159 12 60.9 2 438 88 486 627 WP_297519241.1 DNA polymerase [Thermococcus sp.] diamond 1908 152 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp.
31482969 31482969 PRJNA429937_P_NODE_50296_length_499_cov_4.359574_g2639_i1 PRJNA429937 50296 499 4.359574 21.75427426 root 1 Root_unresolved Root_unresolved 114 4.1e-26   NR WP_336247442.1 2223 g2639 i1 52.5 1.69539078156313 141 57 79.4 3 104 499 245 384 WP_336247442.1 pilus assembly protein N-terminal domain-containing protein [Methanothrix soehngenii] diamond 846 114 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
31498000 31498000 PRJNA429937_P_NODE_63276_length_432_cov_1.955335_g42935_i0 PRJNA429937 63276 432 1.955335 8.4470472 Thermoplasmatales archaeon 2268204 Archaea Archaea 76.3 2.26e-13   NR MEM4379222.1 2268204 g42935 i0 43.7 1.63194444444444 103 36 71.5 1 15 323 14 94 MEM4379222.1 FAD-dependent thymidylate synthase [Thermoplasmatales archaeon] diamond 705 76.3 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
32527059 32527059 PRJNA429937_P_NODE_64439_length_426_cov_4.680101_g2639_i4 PRJNA429937 64439 426 4.680101 19.93723026 root 1 Root_unresolved Root_unresolved 130 4.3199999999999996e-32   NR WP_336247442.1 2223 g2639 i4 55.6 2.12676056338028 151 57 100 3 426 1 235 384 WP_336247442.1 pilus assembly protein N-terminal domain-containing protein [Methanothrix soehngenii] diamond 906 130 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;