RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA429937", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA429937 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9354113 9354113 PRJNA429937_P_NODE_149508_length_184_cov_2.445161_g126881_i0 PRJNA429937 149508 184 2.445161 4.49909624 Allomyces arbusculus 64504 Fungi Fungi 233 5.22e-57   NTclustered gi|1405239019|ref|NG_027623.1| 64504 g126881 i0 89.286 23.6630434782609 196 7 100 2 1 184 1687 1880 Allomyces arbusculus UCBMG Brasil 2 28S rRNA gene, partial sequence; from reference material blastn 4354 233 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
19553324 19553324 PRJNA429937_P_NODE_79416_length_368_cov_2.722714_g57053_i0 PRJNA429937 79416 368 2.722714 10.01958752 Blastocladiales 4805 Fungi Fungi 149 3.25e-39   NR ORZ39162.1 765915 g57053 i0 81 1.28804347826087 79 15 64.4 0 130 366 428 506 ORZ39162.1 hypothetical protein BCR44DRAFT_1479202 [Catenaria anguillulae PL171] diamond 474 149 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
22102279 22102279 PRJNA429937_P_NODE_119098_length_250_cov_18482.864253_g96472_i0 PRJNA429937 119098 250 18482.864253 46207.1606325 Allomyces arbusculus 64504 Fungi Fungi 272 1.6e-68   NTclustered gi|1405239019|ref|NG_027623.1| 64504 g96472 i0 87.448 69.164 239 24 95 6 13 250 2272 2039 Allomyces arbusculus UCBMG Brasil 2 28S rRNA gene, partial sequence; from reference material blastn 17291 272 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;