RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA429937", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_phylum = "Nitrospinota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrospinota · 4 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 4 ✖

bioproject 1

  • PRJNA429937 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28465420 28465420 PRJNA429937_P_NODE_101706_length_297_cov_3.220149_g79092_i0 PRJNA429937 101706 297 3.220149 9.56384253 Nitrospinota bacterium 2026769 Bacteria Bacteria 60.1 8.78e-9   NR MCH7615782.1 2026769 g79092 i0 63 0.929292929292929 46 17 46.5 0 295 158 97 142 MCH7615782.1 tetratricopeptide repeat protein [Nitrospinota bacterium] diamond 276 60.1 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
28812281 28812281 PRJNA429937_P_NODE_104128_length_290_cov_3.616858_g81511_i0 PRJNA429937 104128 290 3.616858 10.4888882 Nitrospinota bacterium 2026769 Bacteria Bacteria 60.5 5.83e-9   NR MCH7615782.1 2026769 g81511 i0 61.7 1.57241379310345 47 18 48.6 0 236 96 96 142 MCH7615782.1 tetratricopeptide repeat protein [Nitrospinota bacterium] diamond 456 60.5 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
29065348 29065348 PRJNA429937_P_NODE_92488_length_325_cov_3.266892_g69902_i0 PRJNA429937 92488 325 3.266892 10.617399 Nitrospinota bacterium 2026769 Bacteria Bacteria 60.1 1.19e-8   NR MCH7615782.1 2026769 g69902 i0 63 0.849230769230769 46 17 42.5 0 323 186 97 142 MCH7615782.1 tetratricopeptide repeat protein [Nitrospinota bacterium] diamond 276 60.1 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
29854614 29854614 PRJNA429937_P_NODE_104851_length_288_cov_3.301158_g82233_i0 PRJNA429937 104851 288 3.301158 9.50733504 Nitrospinota bacterium 2026769 Bacteria Bacteria 60.1 7.92e-9   NR MCH7615782.1 2026769 g82233 i0 63 0.958333333333333 46 17 47.9 0 286 149 97 142 MCH7615782.1 tetratricopeptide repeat protein [Nitrospinota bacterium] diamond 276 60.1 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;