RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA429937" and tax_clade = "Candidatus Pacearchaeota"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Candidatus Pacearchaeota · 3 ✖

bioproject 1

  • PRJNA429937 · 3 ✖

analysis 1

tax_phylum 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26917524 26917524 PRJNA429937_P_NODE_29682_length_669_cov_8.118750_g17999_i0 PRJNA429937 29682 669 8.11875 54.3144375 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 60.1 1.04e-7   NR MCK5625129.1 2026773 g17999 i0 55 0.269058295964126 60 27 26.9 0 298 477 33 92 MCK5625129.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 180 60.1 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
30012683 30012683 PRJNA429937_P_NODE_44211_length_538_cov_7.001965_g28336_i0 PRJNA429937 44211 538 7.001965 37.670571700000004 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 69.7 3.13e-10   NR MAH51556.1 2026773 g28336 i0 46.3 0.446096654275093 80 41 43.5 2 256 23 132 211 MAH51556.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 240 69.7 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
31592939 31592939 PRJNA429937_P_NODE_9096_length_1189_cov_11.247414_g5349_i0 PRJNA429937 9096 1189 11.247414 133.73175246 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 316 7.599999999999999e-100   NR MCK5603948.1 2026773 g5349 i0 70.2 1.13036164844407 225 67 56.8 0 1179 505 293 517 MCK5603948.1 DEAD/DEAH box helicase [Candidatus Pacearchaeota archaeon] diamond 1344 316 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;