RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA429937", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA429937 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26886084 26886084 PRJNA429937_P_NODE_53101_length_483_cov_4.330396_g35029_i0 PRJNA429937 53101 483 4.330396 20.91581268 Minisyncoccota bacterium 2053589 Bacteria Bacteria 68.2 5.79e-10   NR MDR3571313.1 2053589 g35029 i0 35.7 1.04347826086957 168 85 93.2 6 8 457 106 268 MDR3571313.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 504 68.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28023367 28023367 PRJNA429937_P_NODE_43945_length_540_cov_4.761252_g28136_i0 PRJNA429937 43945 540 4.761252 25.7107608 Minisyncoccota bacterium 2053589 Bacteria Bacteria 280 2.9599999999999998e-89   NR HEY6018479.1 2053589 g28136 i0 71 1.01666666666667 183 43 96.1 1 20 538 79 261 HEY6018479.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 549 280 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28212450 28212450 PRJNA429937_P_NODE_24546_length_741_cov_2.816011_g14662_i0 PRJNA429937 24546 741 2.816011 20.86664151 Minisyncoccota bacterium 2053589 Bacteria Bacteria 62.4 3.58e-7   NR HXF44244.1 2053589 g14662 i0 57.7 0.210526315789474 52 22 21.1 0 333 178 315 366 HXF44244.1 ATP-binding protein [Candidatus Paceibacterota bacterium] diamond 156 62.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29208202 29208202 PRJNA429937_P_NODE_108209_length_279_cov_3.152000_g85588_i0 PRJNA429937 108209 279 3.152 8.79408 Bacteria 2 Bacteria Bacteria 57.4 3.84e-7   NR HXF44244.1 2053589 g85588 i0 57.1 2.65591397849462 49 21 52.7 0 5 151 315 363 HXF44244.1 ATP-binding protein [Candidatus Paceibacterota bacterium] diamond 741 57.8 0.993079584775087 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;