RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA429937", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Uhriibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Uhriibacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA429937 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6804841 6804841 PRJNA429937_P_NODE_61966_length_438_cov_1.779951_g41877_i0 PRJNA429937 61966 438 1.779951 7.79618538 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 145 1.78e-38   NR KAA0205495.1 2053634 g41877 i0 69.5 0.719178082191781 105 28 71.9 1 95 409 23 123 KAA0205495.1 MAG: hypothetical protein EDM68_05605 [Candidatus Uhrbacteria bacterium] diamond 315 145 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium
9355190 9355190 PRJNA429937_P_NODE_57708_length_459_cov_1.797674_g38560_i0 PRJNA429937 57708 459 1.797674 8.25132366 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 157 4.6999999999999985e-43   NR KAA0205495.1 2053634 g38560 i0 71.4 0.73202614379085 112 28 73.2 1 365 30 16 123 KAA0205495.1 MAG: hypothetical protein EDM68_05605 [Candidatus Uhrbacteria bacterium] diamond 336 157 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium
20828700 20828700 PRJNA429937_P_NODE_57497_length_460_cov_1.772622_g38409_i0 PRJNA429937 57497 460 1.772622 8.1540612 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 98.2 9.98e-21   NR KAA0205495.1 2053634 g38409 i0 95.7 0.306521739130435 47 2 30.7 0 228 88 23 69 KAA0205495.1 MAG: hypothetical protein EDM68_05605 [Candidatus Uhrbacteria bacterium] diamond 141 98.2 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;