RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA429937", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA429937 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20214044 20214044 PRJNA429937_P_NODE_96436_length_313_cov_2.352113_g73837_i0 PRJNA429937 96436 313 2.352113 7.36211369 Bacteria 2 Bacteria Bacteria 60.2 1.75e-4   NTclustered gi|2874253892|emb|OY970067.1| 991135 g73837 i0 100 13.5782747603834 32 0 10 0 52 83 4739070 4739039 MAG: uncultured candidate division NC10 bacterium isolate MFD01231.bin.c.1 genome assembly, chromosome: 1 blastn 4250 60.2 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         uncultured Methylomirabilota bacterium
27518119 27518119 PRJNA429937_P_NODE_76243_length_379_cov_2.980000_g27443_i3 PRJNA429937 76243 379 2.98 11.2942 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 75.1 6.1e-13   NR MEE9153580.1 2072417 g27443 i3 72 0.395778364116095 50 14 39.6 0 2 151 274 323 MEE9153580.1 S1C family serine protease [Candidatus Methylomirabilota bacterium] diamond 150 75.1 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31988780 31988780 PRJNA429937_P_NODE_86058_length_346_cov_3.328076_g63513_i0 PRJNA429937 86058 346 3.328076 11.51514296 Bacteria 2 Bacteria Bacteria 44.3 0.0114   NR HWN95331.1 2072417 g63513 i0 45.5 0.763005780346821 44 24 38.2 0 214 345 1 44 HWN95331.1 rhodanese-like domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 264 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;