RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA429937", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Elulimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Elulimicrobiota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA429937 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30802369 30802369 PRJNA429937_P_NODE_151594_length_176_cov_2.183673_g128967_i0 PRJNA429937 151594 176 2.183673 3.84326448 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 51.2 1.19e-5   NR NBP55995.1 2802965 g128967 i0 39.3 0.954545454545455 56 32 95.5 1 170 3 88 141 NBP55995.1 radical SAM protein [Candidatus Elulimicrobium humile] diamond 168 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
31592874 31592874 PRJNA429937_P_NODE_116296_length_258_cov_1.838428_g93670_i0 PRJNA429937 116296 258 1.838428 4.74314424 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 46.2 0.00259   NR NBP58035.1 2802965 g93670 i0 50 0.418604651162791 36 18 41.9 0 125 232 115 150 NBP58035.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 108 46.2 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;